Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:54980169-55032481

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sf3b1	1	54985169 to 55027481	42312	-	protein coding gene	splicing factor 3b, subunit 1
Tssr11701	1	55000118 to 55000144	26	-	TSS region	transcription start site region 11701
Tssr11702	1	55001107 to 55001110	3	-	TSS region	transcription start site region 11702
Tssr11703	1	55003478 to 55003497	19	-	TSS region	transcription start site region 11703
D1Dcr38	1	55006848 to 55006943	95		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 38
A430105D02Rik	1	55009204 to 55010357	1153		unclassified gene	RIKEN cDNA A430105D02 gene
Tssr11704	1	55010335 to 55010336	1	-	TSS region	transcription start site region 11704
Tssr11705	1	55019326 to 55019344	18	-	TSS region	transcription start site region 11705
Tssr11706	1	55022090 to 55022095	5	-	TSS region	transcription start site region 11706
Tssr11707	1	55023816 to 55023820	4	-	TSS region	transcription start site region 11707
Tssr6707	1	55026349 to 55026376	27	+	TSS region	transcription start site region 6707
Cpgi259	1	55026820 to 55027745	925		CpG island	CpG island 259
Tssr11708	1	55027377 to 55027406	29	-	TSS region	transcription start site region 11708
Tssr11709	1	55027473 to 55027484	11	-	TSS region	transcription start site region 11709
Tssr6708	1	55027597 to 55027600	3	+	TSS region	transcription start site region 6708