Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:54585340-54986387

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr11692 1 54585451 to 54585463 12 - TSS region transcription start site region 11692
Tssr6704 1 54585733 to 54585765 32 + TSS region transcription start site region 6704
Ankrd44 1 54645340 to 54926387 281047 - protein coding gene ankyrin repeat domain 44
4930444A19Rik 1 54681198 to 54766354 85156 + antisense lncRNA gene RIKEN cDNA 4930444A19 gene
Tssr6705 1 54681760 to 54681770 10 + TSS region transcription start site region 6705
Tssr11693 1 54716862 to 54716868 6 - TSS region transcription start site region 11693
Tssr11694 1 54732715 to 54732719 4 - TSS region transcription start site region 11694
Gm37370 1 54737166 to 54738575 1409 - unclassified gene predicted gene, 37370
Gm24053 1 54769218 to 54769322 104 + miRNA gene predicted gene, 24053
Tssr11695 1 54809964 to 54810001 37 - TSS region transcription start site region 11695
Tssr11696 1 54907164 to 54907175 11 - TSS region transcription start site region 11696
A130048G24Rik 1 54913845 to 54916594 2749 - unclassified gene RIKEN cDNA A130048G24 gene
Tssr11697 1 54914241 to 54914249 8 - TSS region transcription start site region 11697
Cpgi258 1 54925497 to 54926847 1350 CpG island CpG island 258
Tssr6706 1 54926155 to 54926191 36 + TSS region transcription start site region 6706
Tssr11698 1 54926293 to 54926304 11 - TSS region transcription start site region 11698
Tssr11699 1 54926311 to 54926402 91 - TSS region transcription start site region 11699
Tssr11700 1 54926408 to 54926415 7 - TSS region transcription start site region 11700
Sf3b1 1 54985169 to 55027481 42312 - protein coding gene splicing factor 3b, subunit 1