Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:53887718-54397723

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hecw2 1 53806872 to 54195034 388162 - protein coding gene HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
Tssr11675 1 53887736 to 53887746 10 - TSS region transcription start site region 11675
Tssr11676 1 53914628 to 53914639 11 - TSS region transcription start site region 11676
Tssr11677 1 53978511 to 53978530 19 - TSS region transcription start site region 11677
Tssr11678 1 53978540 to 53978584 44 - TSS region transcription start site region 11678
Tssr11679 1 53978607 to 53978617 10 - TSS region transcription start site region 11679
Tssr11680 1 54142718 to 54142723 5 - TSS region transcription start site region 11680
Gm37633 1 54152397 to 54155096 2699 - unclassified gene predicted gene, 37633
Tssr11681 1 54155320 to 54155325 5 - TSS region transcription start site region 11681
Tssr11682 1 54175842 to 54175849 7 - TSS region transcription start site region 11682
Cpgi254 1 54194095 to 54195415 1320 CpG island CpG island 254
Tssr11683 1 54195189 to 54195211 22 - TSS region transcription start site region 11683
Gm25829 1 54249102 to 54249208 106 - snRNA gene predicted gene, 25829
Cpgi255 1 54250499 to 54250827 328 CpG island CpG island 255
Tssr11684 1 54250591 to 54250603 12 - TSS region transcription start site region 11684
Tssr6701 1 54250673 to 54250699 26 + TSS region transcription start site region 6701
Ccdc150 1 54250683 to 54368727 118044 + protein coding gene coiled-coil domain containing 150
Tssr6702 1 54250813 to 54250844 31 + TSS region transcription start site region 6702
Tssr6703 1 54329996 to 54330005 9 + TSS region transcription start site region 6703
Gtf3c3 1 54396004 to 54438971 42967 - protein coding gene general transcription factor IIIC, polypeptide 3
Tssr11685 1 54396945 to 54396951 6 - TSS region transcription start site region 11685