Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:53327006-53776784

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm28551	1	53325507 to 53352667	27160	-	protein coding gene	predicted gene 28551
Gm18800	1	53326181 to 53332724	6543	-	pseudogene	predicted gene, 18800
Tssr11648	1	53342217 to 53342242	25	-	TSS region	transcription start site region 11648
Asnsd1	1	53344617 to 53352752	8135	-	protein coding gene	asparagine synthetase domain containing 1
Cpgi251	1	53352369 to 53352900	531		CpG island	CpG island 251
Tssr11649	1	53352637 to 53352716	79	-	TSS region	transcription start site region 11649
Tssr6693	1	53360389 to 53360397	8	+	TSS region	transcription start site region 6693
Gm28779	1	53362149 to 53362471	322	-	pseudogene	predicted gene 28779
Gm6799	1	53363114 to 53363686	572	+	pseudogene	predicted gene 6799
Gm6801	1	53390415 to 53392585	2170	+	pseudogene	predicted gene 6801
Dnah7a	1	53397006 to 53706784	309778	-	protein coding gene	dynein, axonemal, heavy chain 7A
Gm25240	1	53443271 to 53443395	124	-	miRNA gene	predicted gene, 25240
D1Mit544	1	53523554 to 53523664	110		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 544
Tssr11650	1	53548880 to 53548881	1	-	TSS region	transcription start site region 11650
Gm32311	1	53704477 to 53760971	56494	+	lncRNA gene	predicted gene, 32311
Cpgi252	1	53706445 to 53706941	496		CpG island	CpG island 252
Tssr11651	1	53706775 to 53706841	66	-	TSS region	transcription start site region 11651
Tssr6694	1	53750129 to 53750153	24	+	TSS region	transcription start site region 6694
Tssr11652	1	53751359 to 53751391	32	-	TSS region	transcription start site region 11652
Stk17b	1	53755512 to 53785215	29703	-	protein coding gene	serine/threonine kinase 17b (apoptosis-inducing)
Tssr11653	1	53760773 to 53760777	4	-	TSS region	transcription start site region 11653
Tssr11654	1	53773470 to 53773475	5	-	TSS region	transcription start site region 11654
Tssr11655	1	53774003 to 53774014	11	-	TSS region	transcription start site region 11655
Tssr11656	1	53774073 to 53774085	12	-	TSS region	transcription start site region 11656
Tssr11657	1	53774089 to 53774111	22	-	TSS region	transcription start site region 11657
Tssr11658	1	53774122 to 53774131	9	-	TSS region	transcription start site region 11658
Tssr11659	1	53775649 to 53775673	24	-	TSS region	transcription start site region 11659
Tssr11660	1	53776641 to 53776662	21	-	TSS region	transcription start site region 11660
Tssr11661	1	53776678 to 53776700	22	-	TSS region	transcription start site region 11661
Tssr11662	1	53776702 to 53776707	5	-	TSS region	transcription start site region 11662