MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:53076113-53317695

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm24349	1	53100050 to 53100150	100	+	snoRNA gene	predicted gene, 24349
1700019A02Rik	1	53158577 to 53187636	29059	-	protein coding gene	RIKEN cDNA 1700019A02 gene
Tssr11645	1	53187596 to 53187635	39	-	TSS region	transcription start site region 11645
Pms1	1	53189187 to 53297018	107831	-	protein coding gene	PMS1 homolog 1, mismatch repair system component
Gm28777	1	53196113 to 53197695	1582	+	antisense lncRNA gene	predicted gene 28777
Cpgi250	1	53296620 to 53297445	825		CpG island	CpG island 250
Tssr11646	1	53296958 to 53296997	39	-	TSS region	transcription start site region 11646
Tssr11647	1	53297001 to 53297023	22	-	TSS region	transcription start site region 11647
Tssr6687	1	53297070 to 53297094	24	+	TSS region	transcription start site region 6687
Ormdl1	1	53297095 to 53310245	13150	+	protein coding gene	ORM1-like 1 (S. cerevisiae)
Tssr6688	1	53297096 to 53297124	28	+	TSS region	transcription start site region 6688
Gm28778	1	53297111 to 53318035	20924	+	protein coding gene	predicted gene 28778
Tssr6689	1	53297147 to 53297156	9	+	TSS region	transcription start site region 6689
Tssr6690	1	53313622 to 53313635	13	+	TSS region	transcription start site region 6690
Osgepl1	1	53313624 to 53326343	12719	+	protein coding gene	O-sialoglycoprotein endopeptidase-like 1
Tssr6691	1	53313636 to 53313682	46	+	TSS region	transcription start site region 6691
Tssr6692	1	53313692 to 53313701	9	+	TSS region	transcription start site region 6692
Tssr83	1	53313743 to 53313748	5	+	TSS region	transcription start site region 83