Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:52960050-53240150

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700019D03Rik 1 52922320 to 52991340 69020 - protein coding gene RIKEN cDNA 1700019D03 gene
Tssr11638 1 52963223 to 52963234 11 - TSS region transcription start site region 11638
Tssr11639 1 52963250 to 52963266 16 - TSS region transcription start site region 11639
Tssr11640 1 52963268 to 52963269 1 - TSS region transcription start site region 11640
Tssr11641 1 52963278 to 52963292 14 - TSS region transcription start site region 11641
Tssr11642 1 52972014 to 52972021 7 - TSS region transcription start site region 11642
Tssr11643 1 52972028 to 52972051 23 - TSS region transcription start site region 11643
Tssr11644 1 52992679 to 52992688 9 - TSS region transcription start site region 11644
D1Mit545 1 53004763 to 53004886 123 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology 545
Tssr6686 1 53061637 to 53061642 5 + TSS region transcription start site region 6686
Mstn 1 53061640 to 53068079 6439 + protein coding gene myostatin
Gm24349 1 53100050 to 53100150 100 + snoRNA gene predicted gene, 24349
1700019A02Rik 1 53158577 to 53187636 29059 - protein coding gene RIKEN cDNA 1700019A02 gene
Tssr11645 1 53187596 to 53187635 39 - TSS region transcription start site region 11645
Pms1 1 53189187 to 53297018 107831 - protein coding gene PMS1 homolog 1, mismatch repair system component
Gm28777 1 53196113 to 53197695 1582 + antisense lncRNA gene predicted gene 28777