Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:52795038-52970986

35 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Inpp1	1	52785427 to 52817688	32261	-	protein coding gene	inositol polyphosphate-1-phosphatase
Tssr11619	1	52799485 to 52799518	33	-	TSS region	transcription start site region 11619
Tssr11620	1	52799519 to 52799533	14	-	TSS region	transcription start site region 11620
Tssr11621	1	52799542 to 52799562	20	-	TSS region	transcription start site region 11621
Tssr11622	1	52800388 to 52800405	17	-	TSS region	transcription start site region 11622
Tssr11623	1	52800418 to 52800448	30	-	TSS region	transcription start site region 11623
Cpgi247	1	52817050 to 52817938	888		CpG island	CpG island 247
Tssr11624	1	52817441 to 52817477	36	-	TSS region	transcription start site region 11624
Tssr11625	1	52817503 to 52817583	80	-	TSS region	transcription start site region 11625
Tssr11626	1	52817643 to 52817693	50	-	TSS region	transcription start site region 11626
Tssr11627	1	52817695 to 52817736	41	-	TSS region	transcription start site region 11627
Tssr11628	1	52817738 to 52817778	40	-	TSS region	transcription start site region 11628
Tssr11629	1	52817796 to 52817823	27	-	TSS region	transcription start site region 11629
Cpgi248	1	52844793 to 52845392	599		CpG island	CpG island 248
Tssr6682	1	52845032 to 52845062	30	+	TSS region	transcription start site region 6682
Hibch	1	52845038 to 52920986	75948	+	protein coding gene	3-hydroxyisobutyryl-Coenzyme A hydrolase
Tssr6683	1	52845071 to 52845094	23	+	TSS region	transcription start site region 6683
Tssr6684	1	52845099 to 52845110	11	+	TSS region	transcription start site region 6684
Tssr6685	1	52845115 to 52845123	8	+	TSS region	transcription start site region 6685
Gm16107	1	52873137 to 52873998	861	-	pseudogene	predicted gene 16107
1700019D03Rik	1	52922320 to 52991340	69020	-	protein coding gene	RIKEN cDNA 1700019D03 gene
Tssr82	1	52934561 to 52934563	2	+	TSS region	transcription start site region 82
Tssr11630	1	52947987 to 52948009	22	-	TSS region	transcription start site region 11630
Tssr11631	1	52948011 to 52948018	7	-	TSS region	transcription start site region 11631
Cpgi249	1	52952541 to 52953430	889		CpG island	CpG island 249
Tssr11632	1	52952681 to 52952709	28	-	TSS region	transcription start site region 11632
Tssr11633	1	52952804 to 52952826	22	-	TSS region	transcription start site region 11633
Tssr11634	1	52952834 to 52952854	20	-	TSS region	transcription start site region 11634
Tssr11635	1	52953116 to 52953156	40	-	TSS region	transcription start site region 11635
Tssr11636	1	52953179 to 52953224	45	-	TSS region	transcription start site region 11636
Tssr11637	1	52953596 to 52953627	31	-	TSS region	transcription start site region 11637
Tssr11638	1	52963223 to 52963234	11	-	TSS region	transcription start site region 11638
Tssr11639	1	52963250 to 52963266	16	-	TSS region	transcription start site region 11639
Tssr11640	1	52963268 to 52963269	1	-	TSS region	transcription start site region 11640
Tssr11641	1	52963278 to 52963292	14	-	TSS region	transcription start site region 11641