Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:52589730-52779735

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi244 1 52597874 to 52598175 301 CpG island CpG island 244
Cpgi245 1 52630490 to 52631084 594 CpG island CpG island 245
Tssr6678 1 52630692 to 52630757 65 + TSS region transcription start site region 6678
Nemp2 1 52630703 to 52651919 21216 + protein coding gene nuclear envelope integral membrane protein 2
Tssr6679 1 52637508 to 52637513 5 + TSS region transcription start site region 6679
Gm37242 1 52653808 to 52655892 2084 - unclassified gene predicted gene, 37242
Tssr6680 1 52655527 to 52655532 5 + TSS region transcription start site region 6680
Mfsd6 1 52656299 to 52727462 71163 - protein coding gene major facilitator superfamily domain containing 6
Tssr11608 1 52658238 to 52658262 24 - TSS region transcription start site region 11608
Tssr11609 1 52658277 to 52658296 19 - TSS region transcription start site region 11609
Tssr11610 1 52661001 to 52661043 42 - TSS region transcription start site region 11610
Tssr6681 1 52684730 to 52684735 5 + TSS region transcription start site region 6681
Gm29670 1 52702272 to 52704762 2490 - sense intronic lncRNA gene predicted gene 29670
Cpgi246 1 52726359 to 52727727 1368 CpG island CpG island 246
Tssr11611 1 52726798 to 52726820 22 - TSS region transcription start site region 11611
Tssr11612 1 52726824 to 52726870 46 - TSS region transcription start site region 11612
Tssr11613 1 52727127 to 52727161 34 - TSS region transcription start site region 11613
Tssr11614 1 52727255 to 52727268 13 - TSS region transcription start site region 11614
Tssr11615 1 52727296 to 52727382 86 - TSS region transcription start site region 11615
Tssr11616 1 52727457 to 52727474 17 - TSS region transcription start site region 11616
Tssr11617 1 52734294 to 52734310 16 - TSS region transcription start site region 11617
Gm28650 1 52756719 to 52757129 410 + pseudogene predicted gene 28650