Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:52468476-52668487

27 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Nab1	1	52457294 to 52500679	43385	-	protein coding gene	Ngfi-A binding protein 1
Tssr11603	1	52472933 to 52472937	4	-	TSS region	transcription start site region 11603
Tssr11604	1	52498942 to 52498945	3	-	TSS region	transcription start site region 11604
Cpgi243	1	52499688 to 52501030	1342		CpG island	CpG island 243
Tssr6674	1	52500009 to 52500071	62	+	TSS region	transcription start site region 6674
Tssr11605	1	52500236 to 52500276	40	-	TSS region	transcription start site region 11605
Tssr11606	1	52500353 to 52500449	96	-	TSS region	transcription start site region 11606
Tssr6675	1	52500648 to 52500651	3	+	TSS region	transcription start site region 6675
Gm5976	1	52503234 to 52504229	995	-	pseudogene	predicted gene 5976
Tssr11607	1	52504299 to 52504300	1	-	TSS region	transcription start site region 11607
Gm553	1	52504495 to 52520703	16208	+	lincRNA gene	predicted gene 553
Rps27a-ps1	1	52522239 to 52522701	462	+	pseudogene	ribosomal protein S27A, pseudogene 1
Tssr6676	1	52568476 to 52568487	11	+	TSS region	transcription start site region 6676
Tssr6677	1	52568495 to 52568504	9	+	TSS region	transcription start site region 6677
Gm28178	1	52570014 to 52580291	10277	-	lincRNA gene	predicted gene 28178
Gm5527	1	52584518 to 52585159	641	+	pseudogene	predicted gene 5527
Cpgi244	1	52597874 to 52598175	301		CpG island	CpG island 244
Cpgi245	1	52630490 to 52631084	594		CpG island	CpG island 245
Tssr6678	1	52630692 to 52630757	65	+	TSS region	transcription start site region 6678
Nemp2	1	52630703 to 52651919	21216	+	protein coding gene	nuclear envelope integral membrane protein 2
Tssr6679	1	52637508 to 52637513	5	+	TSS region	transcription start site region 6679
Gm37242	1	52653808 to 52655892	2084	-	unclassified gene	predicted gene, 37242
Tssr6680	1	52655527 to 52655532	5	+	TSS region	transcription start site region 6680
Mfsd6	1	52656299 to 52727462	71163	-	protein coding gene	major facilitator superfamily domain containing 6
Tssr11608	1	52658238 to 52658262	24	-	TSS region	transcription start site region 11608
Tssr11609	1	52658277 to 52658296	19	-	TSS region	transcription start site region 11609
Tssr11610	1	52661001 to 52661043	42	-	TSS region	transcription start site region 11610