Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:52405648-52595651

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D1Mit18 1 52418578 to 52418733 155 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 18
Gm23460 1 52444436 to 52444544 108 - snRNA gene predicted gene, 23460
Nab1 1 52457294 to 52500679 43385 - protein coding gene Ngfi-A binding protein 1
Tssr11603 1 52472933 to 52472937 4 - TSS region transcription start site region 11603
Tssr11604 1 52498942 to 52498945 3 - TSS region transcription start site region 11604
Cpgi243 1 52499688 to 52501030 1342 CpG island CpG island 243
Tssr6674 1 52500009 to 52500071 62 + TSS region transcription start site region 6674
Tssr11605 1 52500236 to 52500276 40 - TSS region transcription start site region 11605
Tssr11606 1 52500353 to 52500449 96 - TSS region transcription start site region 11606
Tssr6675 1 52500648 to 52500651 3 + TSS region transcription start site region 6675
Gm5976 1 52503234 to 52504229 995 - pseudogene predicted gene 5976
Tssr11607 1 52504299 to 52504300 1 - TSS region transcription start site region 11607
Gm553 1 52504495 to 52520703 16208 + lincRNA gene predicted gene 553
Rps27a-ps1 1 52522239 to 52522701 462 + pseudogene ribosomal protein S27A, pseudogene 1
Tssr6676 1 52568476 to 52568487 11 + TSS region transcription start site region 6676
Tssr6677 1 52568495 to 52568504 9 + TSS region transcription start site region 6677
Gm28178 1 52570014 to 52580291 10277 - lincRNA gene predicted gene 28178
Gm5527 1 52584518 to 52585159 641 + pseudogene predicted gene 5527
Aec2 1 182423027 to 52418578 -130004449 QTL autoimmune exocrinopathy 2