Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:52151932-52313715

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm28177 1 52077261 to 52156087 78826 + unclassified non-coding RNA gene predicted gene 28177
Stat1 1 52119440 to 52161865 42425 + protein coding gene signal transducer and activator of transcription 1
Tssr6662 1 52152291 to 52152303 12 + TSS region transcription start site region 6662
Tssr6663 1 52152325 to 52152343 18 + TSS region transcription start site region 6663
Tssr6664 1 52152351 to 52152358 7 + TSS region transcription start site region 6664
Tssr6665 1 52153835 to 52153850 15 + TSS region transcription start site region 6665
Tssr6666 1 52155097 to 52155112 15 + TSS region transcription start site region 6666
Tssr6667 1 52155114 to 52155131 17 + TSS region transcription start site region 6667
Tssr6668 1 52155137 to 52155162 25 + TSS region transcription start site region 6668
Tssr6669 1 52155198 to 52155217 19 + TSS region transcription start site region 6669
Tssr6670 1 52155218 to 52155252 34 + TSS region transcription start site region 6670
Tssr6671 1 52155283 to 52155312 29 + TSS region transcription start site region 6671
Tssr6672 1 52155341 to 52155359 18 + TSS region transcription start site region 6672
Tssr11591 1 52155367 to 52155379 12 - TSS region transcription start site region 11591
Tssr11592 1 52155401 to 52155412 11 - TSS region transcription start site region 11592
Gls 1 52163448 to 52233232 69784 - protein coding gene glutaminase
Tssr11593 1 52164663 to 52164679 16 - TSS region transcription start site region 11593
Tssr11594 1 52164713 to 52164724 11 - TSS region transcription start site region 11594
Tssr11595 1 52164838 to 52164859 21 - TSS region transcription start site region 11595
D1Ncl2 1 52175927 to 52176086 159 DNA segment DNA segment, Chr 1, Nicolas C. Levy 2
Tssr6673 1 52177376 to 52177378 2 + TSS region transcription start site region 6673
Tssr11596 1 52190901 to 52190915 14 - TSS region transcription start site region 11596
Tssr11597 1 52190929 to 52190931 2 - TSS region transcription start site region 11597
Cpgi242 1 52231932 to 52233715 1783 CpG island CpG island 242
Tssr11598 1 52232401 to 52232432 31 - TSS region transcription start site region 11598
Tssr11599 1 52232981 to 52232998 17 - TSS region transcription start site region 11599
Tssr11600 1 52233006 to 52233032 26 - TSS region transcription start site region 11600
Tssr11601 1 52233075 to 52233097 22 - TSS region transcription start site region 11601
Tssr11602 1 52233211 to 52233229 18 - TSS region transcription start site region 11602
Gm31867 1 52249320 to 52258151 8831 - lncRNA gene predicted gene, 31867
D1Ncl3 1 52249775 to 52249960 185 DNA segment DNA segment, Chr 1, Nicolas C. Levy 3
Gm5975 1 52287721 to 52289095 1374 - pseudogene predicted gene 5975
Gm31955 1 52305615 to 52367667 62052 + lncRNA gene predicted gene, 31955