Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 1:52040635-52141066

Filter by:
23 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stat4 1 51987148 to 52107189 120041 + protein coding gene signal transducer and activator of transcription 4
Gm28177 1 52077261 to 52156087 78826 + lncRNA gene predicted gene 28177
Gm3940 1 52090635 to 52091066 431 - pseudogene predicted gene 3940
Tssr11589 1 52091066 to 52091078 12 - TSS region transcription start site region 11589
Gm31812 1 52108121 to 52113751 5630 - lncRNA gene predicted gene, 31812
Cpgi240 1 52113520 to 52114017 497 CpG island CpG island 240
Cpgi241 1 52119228 to 52120063 835 CpG island CpG island 241
Stat1 1 52119440 to 52161865 42425 + protein coding gene signal transducer and activator of transcription 1
Tssr6645 1 52119471 to 52119499 28 + TSS region transcription start site region 6645
Tssr6646 1 52119534 to 52119557 23 + TSS region transcription start site region 6646
Tssr6647 1 52119562 to 52119589 27 + TSS region transcription start site region 6647
Tssr81 1 52119873 to 52119896 23 + TSS region transcription start site region 81
Tssr6648 1 52119896 to 52119935 39 + TSS region transcription start site region 6648
Tssr6649 1 52123109 to 52123233 124 + TSS region transcription start site region 6649
Tssr6650 1 52126508 to 52126565 57 + TSS region transcription start site region 6650
Tssr6651 1 52127731 to 52127744 13 + TSS region transcription start site region 6651
Tssr6652 1 52132546 to 52132561 15 + TSS region transcription start site region 6652
Tssr6653 1 52132588 to 52132599 11 + TSS region transcription start site region 6653
Gm18301 1 52134443 to 52135330 887 - pseudogene predicted gene, 18301
Tssr6654 1 52137386 to 52137402 16 + TSS region transcription start site region 6654
Tssr6655 1 52139247 to 52139268 21 + TSS region transcription start site region 6655
Tssr6656 1 52139274 to 52139294 20 + TSS region transcription start site region 6656
Tssr11590 1 52140428 to 52140432 4 - TSS region transcription start site region 11590