Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:51104245-51474279

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmeff2 1 50927523 to 51187270 259747 + protein coding gene transmembrane protein with EGF-like and two follistatin-like domains 2
Gm28319 1 51138281 to 51141222 2941 - antisense lncRNA gene predicted gene 28319
Gm28320 1 51148309 to 51150581 2272 + sense intronic lncRNA gene predicted gene 28320
Gm29325 1 51195221 to 51197748 2527 + lincRNA gene predicted gene 29325
9330175M20Rik 1 51218386 to 51333779 115393 - antisense lncRNA gene RIKEN cDNA 9330175M20 gene
Tssr80 1 51250064 to 51250080 16 - TSS region transcription start site region 80
Tssr6622 1 51289106 to 51289142 36 + TSS region transcription start site region 6622
Cavin2 1 51289126 to 51302960 13834 + protein coding gene caveolae associated 2
Tssr6623 1 51289245 to 51289279 34 + TSS region transcription start site region 6623
Tssr6624 1 51289285 to 51289315 30 + TSS region transcription start site region 6624
Tssr6625 1 51289361 to 51289370 9 + TSS region transcription start site region 6625
Cpgi236 1 51289523 to 51289920 397 CpG island CpG island 236
Gm5253 1 51317531 to 51318552 1021 - pseudogene predicted gene 5253
D1Mit323 1 51386279 to 51386441 162 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 323
Cpgi237 1 51426594 to 51426789 195 CpG island CpG island 237
1700072G22Rik 1 51457932 to 51458931 999 - lincRNA gene RIKEN cDNA 1700072G22 gene
Nabp1 1 51465862 to 51478425 12563 - protein coding gene nucleic acid binding protein 1
Tssr11563 1 51466107 to 51466115 8 - TSS region transcription start site region 11563
Tssr11564 1 51473425 to 51473467 42 - TSS region transcription start site region 11564
Tssr11565 1 51473943 to 51473978 35 - TSS region transcription start site region 11565
Tssr11566 1 51474017 to 51474046 29 - TSS region transcription start site region 11566