MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:5082739-5535017

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi14	1	5082921 to 5083542	621		CpG island	CpG island 14
Atp6v1h	1	5082978 to 5163213	80235	+	protein coding gene	ATPase, H+ transporting, lysosomal V1 subunit H
Tssr5811	1	5083105 to 5083160	55	+	TSS region	transcription start site region 5811
Tssr5812	1	5083169 to 5083186	17	+	TSS region	transcription start site region 5812
Tssr5813	1	5083206 to 5083217	11	+	TSS region	transcription start site region 5813
Tssr1	1	5083521 to 5083530	9	+	TSS region	transcription start site region 1
Tssr5814	1	5083560 to 5083587	27	+	TSS region	transcription start site region 5814
Tssr10900	1	5084523 to 5084544	21	-	TSS region	transcription start site region 10900
Tssr5815	1	5094136 to 5094140	4	+	TSS region	transcription start site region 5815
Tssr5816	1	5098061 to 5098109	48	+	TSS region	transcription start site region 5816
Tssr5817	1	5105326 to 5105334	8	+	TSS region	transcription start site region 5817
Tssr5818	1	5115205 to 5115211	6	+	TSS region	transcription start site region 5818
Tssr5819	1	5139383 to 5139388	5	+	TSS region	transcription start site region 5819
B230334L07Rik	1	5156596 to 5158505	1909		unclassified gene	RIKEN cDNA B230334L07 gene
Tssr10901	1	5170639 to 5170674	35	-	TSS region	transcription start site region 10901
Gm7182	1	5276110 to 5276798	688	-	pseudogene	predicted gene 7182
Gm37567	1	5307739 to 5310017	2278	+	unclassified gene	predicted gene, 37567
Gm19070	1	5319710 to 5320327	617	-	pseudogene	predicted gene, 19070
Gm38264	1	5403547 to 5405578	2031	+	unclassified gene	predicted gene, 38264