Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:46157544-47542852

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnah7b 1 46066315 to 46373546 307231 + protein coding gene dynein, axonemal, heavy chain 7B
Gm31046 1 46221792 to 46233437 11645 - lncRNA gene predicted gene, 31046
n-R5s211 1 46374197 to 46374315 118 + rRNA gene nuclear encoded rRNA 5S 211
Gm8326 1 46414502 to 46416932 2430 + pseudogene predicted gene 8326
Tssr11543 1 46425427 to 46425437 10 - TSS region transcription start site region 11543
Tssr6612 1 46425442 to 46425447 5 + TSS region transcription start site region 6612
Cpgi233 1 46425450 to 46425747 297 CpG island CpG island 233
Tssr6613 1 46425464 to 46425515 51 + TSS region transcription start site region 6613
Dnah7c 1 46425592 to 46807476 381884 + protein coding gene dynein, axonemal, heavy chain 7C
Tssr74 1 46427149 to 46427150 1 + TSS region transcription start site region 74
Tssr6614 1 46748117 to 46748120 3 + TSS region transcription start site region 6614
Slc39a10 1 46807544 to 46892852 85308 - protein coding gene solute carrier family 39 (zinc transporter), member 10
Gm28151 1 46849529 to 46850479 950 - lincRNA gene predicted gene 28151
Cpgi234 1 46852575 to 46854204 1629 CpG island CpG island 234
Tssr75 1 46852782 to 46852795 13 - TSS region transcription start site region 75
Tssr6615 1 46852916 to 46852931 15 + TSS region transcription start site region 6615
Tssr11544 1 46853423 to 46853442 19 - TSS region transcription start site region 11544
Tssr11545 1 46853482 to 46853571 89 - TSS region transcription start site region 11545
Tssr11546 1 46853583 to 46853605 22 - TSS region transcription start site region 11546
Tssr11547 1 46853609 to 46853630 21 - TSS region transcription start site region 11547
Tssr11548 1 46853849 to 46853862 13 - TSS region transcription start site region 11548
Tssr11549 1 46853883 to 46853916 33 - TSS region transcription start site region 11549
Tssr11550 1 46854052 to 46854079 27 - TSS region transcription start site region 11550
Gm37393 1 46877203 to 46881072 3869 - unclassified gene predicted gene, 37393
Tssr11551 1 46888085 to 46888100 15 - TSS region transcription start site region 11551
Tssr11552 1 46888133 to 46888140 7 - TSS region transcription start site region 11552
Tssr11553 1 46888141 to 46888153 12 - TSS region transcription start site region 11553
Tssr11554 1 46893022 to 46893031 9 - TSS region transcription start site region 11554
Tssr11555 1 46893049 to 46893066 17 - TSS region transcription start site region 11555
Tssr76 1 46893079 to 46893084 5 - TSS region transcription start site region 76
Tssr11556 1 46893132 to 46893136 4 - TSS region transcription start site region 11556
Tssr6616 1 46894631 to 46894658 27 + TSS region transcription start site region 6616
Gm28527 1 46896583 to 46896879 296 - pseudogene predicted gene 28527
Tssr11557 1 46925756 to 46925772 16 - TSS region transcription start site region 11557
Tssr11558 1 46925785 to 46925804 19 - TSS region transcription start site region 11558
Gm28825 1 47067788 to 47068025 237 + pseudogene predicted gene 28825
Tssr6617 1 47091158 to 47091164 6 + TSS region transcription start site region 6617
Gm28826 1 47153461 to 47189071 35610 + lincRNA gene predicted gene 28826
AU014756 1 47190578 to 47191218 640 unclassified gene expressed sequence AU014756
Gm39638 1 47251863 to 47288100 36237 + lncRNA gene predicted gene, 39638
Gm4852 1 47365644 to 47366372 728 - pseudogene predicted pseudogene 4852
Gm39639 1 47433524 to 47461160 27636 + lncRNA gene predicted gene, 39639
Gm38090 1 47433824 to 47435765 1941 - unclassified gene predicted gene, 38090
Mir6350 1 47467021 to 47467125 104 - miRNA gene microRNA 6350
Gm18117 1 47479511 to 47480198 687 + pseudogene predicted gene, 18117