Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:45985464-46865515

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm3852 1 46011757 to 46012020 263 - pseudogene predicted gene 3852
Stk-ps2 1 46020415 to 46030437 10022 - pseudogene serine/threonine kinase 2
Gm18849 1 46056310 to 46058986 2676 + pseudogene predicted gene, 18849
Dnah7b 1 46066315 to 46373546 307231 + protein coding gene dynein, axonemal, heavy chain 7B
Cpgi231 1 46066726 to 46067148 422 CpG island CpG island 231
Tssr6609 1 46066820 to 46066844 24 + TSS region transcription start site region 6609
Tssr6610 1 46066846 to 46066895 49 + TSS region transcription start site region 6610
Tssr11542 1 46076021 to 46076053 32 - TSS region transcription start site region 11542
Cpgi232 1 46088738 to 46089409 671 CpG island CpG island 232
Tssr6611 1 46088874 to 46088881 7 + TSS region transcription start site region 6611
Gm31046 1 46221792 to 46233437 11645 - lncRNA gene predicted gene, 31046
n-R5s211 1 46374197 to 46374315 118 + rRNA gene nuclear encoded rRNA 5S 211
Gm8326 1 46414502 to 46416932 2430 + pseudogene predicted gene 8326
Tssr11543 1 46425427 to 46425437 10 - TSS region transcription start site region 11543
Tssr6612 1 46425442 to 46425447 5 + TSS region transcription start site region 6612
Cpgi233 1 46425450 to 46425747 297 CpG island CpG island 233
Tssr6613 1 46425464 to 46425515 51 + TSS region transcription start site region 6613
Dnah7c 1 46425592 to 46807476 381884 + protein coding gene dynein, axonemal, heavy chain 7C
Tssr74 1 46427149 to 46427150 1 + TSS region transcription start site region 74
Tssr6614 1 46748117 to 46748120 3 + TSS region transcription start site region 6614
Slc39a10 1 46807544 to 46892852 85308 - protein coding gene solute carrier family 39 (zinc transporter), member 10
Gm28151 1 46849529 to 46850479 950 - lincRNA gene predicted gene 28151
Cpgi234 1 46852575 to 46854204 1629 CpG island CpG island 234
Tssr75 1 46852782 to 46852795 13 - TSS region transcription start site region 75
Tssr6615 1 46852916 to 46852931 15 + TSS region transcription start site region 6615
Tssr11544 1 46853423 to 46853442 19 - TSS region transcription start site region 11544
Tssr11545 1 46853482 to 46853571 89 - TSS region transcription start site region 11545
Tssr11546 1 46853583 to 46853605 22 - TSS region transcription start site region 11546
Tssr11547 1 46853609 to 46853630 21 - TSS region transcription start site region 11547
Tssr11548 1 46853849 to 46853862 13 - TSS region transcription start site region 11548
Tssr11549 1 46853883 to 46853916 33 - TSS region transcription start site region 11549
Tssr11550 1 46854052 to 46854079 27 - TSS region transcription start site region 11550