MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:45921846-46211895

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slc40a1	1	45908068 to 45926523	18455	-	protein coding gene	solute carrier family 40 (iron-regulated transporter), member 1
Cpgi230	1	45925281 to 45926146	865		CpG island	CpG island 230
Tssr11538	1	45925570 to 45925588	18	-	TSS region	transcription start site region 11538
Tssr73	1	45925599 to 45925604	5	-	TSS region	transcription start site region 73
Tssr11539	1	45926501 to 45926560	59	-	TSS region	transcription start site region 11539
Tssr11540	1	45927968 to 45927985	17	-	TSS region	transcription start site region 11540
Tssr11541	1	45927999 to 45928009	10	-	TSS region	transcription start site region 11541
Gm9496	1	45971182 to 45976975	5793	+	pseudogene	predicted gene 9496
Rpl23a-ps1	1	45981548 to 45982012	464	+	pseudogene	ribosomal protein 23A, pseudogene 1
Gm3852	1	46011757 to 46012020	263	-	pseudogene	predicted gene 3852
Stk-ps2	1	46020415 to 46030437	10022	-	pseudogene	serine/threonine kinase 2
Gm18849	1	46056310 to 46058986	2676	+	pseudogene	predicted gene, 18849
Dnah7b	1	46066315 to 46373546	307231	+	protein coding gene	dynein, axonemal, heavy chain 7B
Cpgi231	1	46066726 to 46067148	422		CpG island	CpG island 231
Tssr6609	1	46066820 to 46066844	24	+	TSS region	transcription start site region 6609
Tssr6610	1	46066846 to 46066895	49	+	TSS region	transcription start site region 6610
Tssr11542	1	46076021 to 46076053	32	-	TSS region	transcription start site region 11542
Cpgi232	1	46088738 to 46089409	671		CpG island	CpG island 232
Tssr6611	1	46088874 to 46088881	7	+	TSS region	transcription start site region 6611