Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:45871315-46568546

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sagg 1 40262417 to 45874398 5611981 heritable phenotypic marker saggy
Tssr11537 1 45873376 to 45873423 47 - TSS region transcription start site region 11537
D1Mit234.1 1 45874202 to 45874333 131 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 234.1
D1Mit234 1 45874254 to 45874398 144 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 234
Tssr6608 1 45881725 to 45881736 11 + TSS region transcription start site region 6608
Gm5269 1 45889525 to 45890273 748 - pseudogene predicted gene 5269
Gm18303 1 45905623 to 45906798 1175 + pseudogene predicted gene, 18303
Slc40a1 1 45908068 to 45926523 18455 - protein coding gene solute carrier family 40 (iron-regulated transporter), member 1
Cpgi230 1 45925281 to 45926146 865 CpG island CpG island 230
Tssr11538 1 45925570 to 45925588 18 - TSS region transcription start site region 11538
Tssr73 1 45925599 to 45925604 5 - TSS region transcription start site region 73
Tssr11539 1 45926501 to 45926560 59 - TSS region transcription start site region 11539
Tssr11540 1 45927968 to 45927985 17 - TSS region transcription start site region 11540
Tssr11541 1 45927999 to 45928009 10 - TSS region transcription start site region 11541
Gm9496 1 45971182 to 45976975 5793 + pseudogene predicted gene 9496
Rpl23a-ps1 1 45981548 to 45982012 464 + pseudogene ribosomal protein 23A, pseudogene 1
Gm3852 1 46011757 to 46012020 263 - pseudogene predicted gene 3852
Stk-ps2 1 46020415 to 46030437 10022 - pseudogene serine/threonine kinase 2
Gm18849 1 46056310 to 46058986 2676 + pseudogene predicted gene, 18849
Dnah7b 1 46066315 to 46373546 307231 + protein coding gene dynein, axonemal, heavy chain 7B
Cpgi231 1 46066726 to 46067148 422 CpG island CpG island 231
Tssr6609 1 46066820 to 46066844 24 + TSS region transcription start site region 6609
Tssr6610 1 46066846 to 46066895 49 + TSS region transcription start site region 6610
Tssr11542 1 46076021 to 46076053 32 - TSS region transcription start site region 11542
Cpgi232 1 46088738 to 46089409 671 CpG island CpG island 232
Tssr6611 1 46088874 to 46088881 7 + TSS region transcription start site region 6611
Gm31046 1 46221792 to 46233437 11645 - lncRNA gene predicted gene, 31046
n-R5s211 1 46374197 to 46374315 118 + rRNA gene nuclear encoded rRNA 5S 211
Gm8326 1 46414502 to 46416932 2430 + pseudogene predicted gene 8326
Tssr11543 1 46425427 to 46425437 10 - TSS region transcription start site region 11543
Tssr6612 1 46425442 to 46425447 5 + TSS region transcription start site region 6612
Cpgi233 1 46425450 to 46425747 297 CpG island CpG island 233
Tssr6613 1 46425464 to 46425515 51 + TSS region transcription start site region 6613
Dnah7c 1 46425592 to 46807476 381884 + protein coding gene dynein, axonemal, heavy chain 7C
Tssr74 1 46427149 to 46427150 1 + TSS region transcription start site region 74