Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:45866315-46573546

35 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sagg	1	40262417 to 45874398	5611981		heritable phenotypic marker	saggy
Tssr11537	1	45873376 to 45873423	47	-	TSS region	transcription start site region 11537
D1Mit234.1	1	45874202 to 45874333	131		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 234.1
D1Mit234	1	45874254 to 45874398	144		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 234
Tssr6608	1	45881725 to 45881736	11	+	TSS region	transcription start site region 6608
Gm5269	1	45889525 to 45890273	748	-	pseudogene	predicted gene 5269
Gm18303	1	45905623 to 45906798	1175	+	pseudogene	predicted gene, 18303
Slc40a1	1	45908068 to 45926523	18455	-	protein coding gene	solute carrier family 40 (iron-regulated transporter), member 1
Cpgi230	1	45925281 to 45926146	865		CpG island	CpG island 230
Tssr11538	1	45925570 to 45925588	18	-	TSS region	transcription start site region 11538
Tssr73	1	45925599 to 45925604	5	-	TSS region	transcription start site region 73
Tssr11539	1	45926501 to 45926560	59	-	TSS region	transcription start site region 11539
Tssr11540	1	45927968 to 45927985	17	-	TSS region	transcription start site region 11540
Tssr11541	1	45927999 to 45928009	10	-	TSS region	transcription start site region 11541
Gm9496	1	45971182 to 45976975	5793	+	pseudogene	predicted gene 9496
Rpl23a-ps1	1	45981548 to 45982012	464	+	pseudogene	ribosomal protein 23A, pseudogene 1
Gm3852	1	46011757 to 46012020	263	-	pseudogene	predicted gene 3852
Stk-ps2	1	46020415 to 46030437	10022	-	pseudogene	serine/threonine kinase 2
Gm18849	1	46056310 to 46058986	2676	+	pseudogene	predicted gene, 18849
Dnah7b	1	46066315 to 46373546	307231	+	protein coding gene	dynein, axonemal, heavy chain 7B
Cpgi231	1	46066726 to 46067148	422		CpG island	CpG island 231
Tssr6609	1	46066820 to 46066844	24	+	TSS region	transcription start site region 6609
Tssr6610	1	46066846 to 46066895	49	+	TSS region	transcription start site region 6610
Tssr11542	1	46076021 to 46076053	32	-	TSS region	transcription start site region 11542
Cpgi232	1	46088738 to 46089409	671		CpG island	CpG island 232
Tssr6611	1	46088874 to 46088881	7	+	TSS region	transcription start site region 6611
Gm31046	1	46221792 to 46233437	11645	-	lncRNA gene	predicted gene, 31046
n-R5s211	1	46374197 to 46374315	118	+	rRNA gene	nuclear encoded rRNA 5S 211
Gm8326	1	46414502 to 46416932	2430	+	pseudogene	predicted gene 8326
Tssr11543	1	46425427 to 46425437	10	-	TSS region	transcription start site region 11543
Tssr6612	1	46425442 to 46425447	5	+	TSS region	transcription start site region 6612
Cpgi233	1	46425450 to 46425747	297		CpG island	CpG island 233
Tssr6613	1	46425464 to 46425515	51	+	TSS region	transcription start site region 6613
Dnah7c	1	46425592 to 46807476	381884	+	protein coding gene	dynein, axonemal, heavy chain 7C
Tssr74	1	46427149 to 46427150	1	+	TSS region	transcription start site region 74