Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:45348056-45658071

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col3a1 1 45311538 to 45349706 38168 + protein coding gene collagen, type III, alpha 1
Tssr6595 1 45348607 to 45348624 17 + TSS region transcription start site region 6595
Tssr6596 1 45348630 to 45348665 35 + TSS region transcription start site region 6596
Tssr6597 1 45348715 to 45348756 41 + TSS region transcription start site region 6597
Tssr6598 1 45348784 to 45348829 45 + TSS region transcription start site region 6598
Tssr6599 1 45348891 to 45348936 45 + TSS region transcription start site region 6599
Tssr6600 1 45348950 to 45348961 11 + TSS region transcription start site region 6600
Tssr6601 1 45348964 to 45348996 32 + TSS region transcription start site region 6601
Tssr72 1 45349599 to 45349602 3 + TSS region transcription start site region 72
Col5a2 1 45374331 to 45503282 128951 - protein coding gene collagen, type V, alpha 2
D1Mit236 1 45378613 to 45378760 147 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 236
Eae30 1 45378613 to 72935898 27557285 QTL experimental allergic encephalomyelitis susceptibility 30
Habiir1 1 45378613 to 51924960 6546347 QTL hyperoxic acute lung injury imprinted region 1
Tssr6602 1 45402094 to 45402106 12 + TSS region transcription start site region 6602
Tssr11534 1 45442717 to 45442752 35 - TSS region transcription start site region 11534
Gm38211 1 45485836 to 45493052 7216 - unclassified gene predicted gene, 38211
Tssr11535 1 45502565 to 45502568 3 - TSS region transcription start site region 11535
Tssr11536 1 45503056 to 45503071 15 - TSS region transcription start site region 11536
D1Dcr36 1 45509123 to 45509218 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 36
Gm8296 1 45513532 to 45514055 523 - pseudogene predicted gene 8296
Gm7063 1 45519774 to 45520754 980 - pseudogene predicted gene 7063
Gm8304 1 45602026 to 45602753 727 + pseudogene predicted gene 8304