Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:45342717-45542752

31 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Col3a1	1	45311538 to 45349706	38168	+	protein coding gene	collagen, type III, alpha 1
Tssr11532	1	45343488 to 45343504	16	-	TSS region	transcription start site region 11532
Tssr11533	1	45345044 to 45345061	17	-	TSS region	transcription start site region 11533
Tssr6587	1	45345841 to 45345855	14	+	TSS region	transcription start site region 6587
Tssr6588	1	45345856 to 45345928	72	+	TSS region	transcription start site region 6588
Tssr6589	1	45345943 to 45345985	42	+	TSS region	transcription start site region 6589
Tssr6590	1	45346037 to 45346058	21	+	TSS region	transcription start site region 6590
Tssr6591	1	45347188 to 45347227	39	+	TSS region	transcription start site region 6591
Tssr6592	1	45347632 to 45347694	62	+	TSS region	transcription start site region 6592
Tssr6593	1	45347702 to 45347764	62	+	TSS region	transcription start site region 6593
Tssr6594	1	45347769 to 45347787	18	+	TSS region	transcription start site region 6594
Tssr6595	1	45348607 to 45348624	17	+	TSS region	transcription start site region 6595
Tssr6596	1	45348630 to 45348665	35	+	TSS region	transcription start site region 6596
Tssr6597	1	45348715 to 45348756	41	+	TSS region	transcription start site region 6597
Tssr6598	1	45348784 to 45348829	45	+	TSS region	transcription start site region 6598
Tssr6599	1	45348891 to 45348936	45	+	TSS region	transcription start site region 6599
Tssr6600	1	45348950 to 45348961	11	+	TSS region	transcription start site region 6600
Tssr6601	1	45348964 to 45348996	32	+	TSS region	transcription start site region 6601
Tssr72	1	45349599 to 45349602	3	+	TSS region	transcription start site region 72
Col5a2	1	45374331 to 45503282	128951	-	protein coding gene	collagen, type V, alpha 2
Habiir1	1	45378613 to 51924960	6546347		QTL	hyperoxic acute lung injury imprinted region 1
Eae30	1	45378613 to 72935898	27557285		QTL	experimental allergic encephalomyelitis susceptibility 30
D1Mit236	1	45378613 to 45378760	147		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 236
Tssr6602	1	45402094 to 45402106	12	+	TSS region	transcription start site region 6602
Tssr11534	1	45442717 to 45442752	35	-	TSS region	transcription start site region 11534
Gm38211	1	45485836 to 45493052	7216	-	unclassified gene	predicted gene, 38211
Tssr11535	1	45502565 to 45502568	3	-	TSS region	transcription start site region 11535
Tssr11536	1	45503056 to 45503071	15	-	TSS region	transcription start site region 11536
D1Dcr36	1	45509123 to 45509218	95		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 36
Gm8296	1	45513532 to 45514055	523	-	pseudogene	predicted gene 8296
Gm7063	1	45519774 to 45520754	980	-	pseudogene	predicted gene 7063