Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:4440931-4547354

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sox17	1	4490931 to 4497354	6423	-	protein coding gene	SRY (sex determining region Y)-box 17
Cpgi4	1	4491620 to 4493791	2171		CpG island	CpG island 4
Tssr10877	1	4493598 to 4493614	16	-	TSS region	transcription start site region 10877
Tssr10878	1	4496372 to 4496389	17	-	TSS region	transcription start site region 10878
Tssr10879	1	4496400 to 4496420	20	-	TSS region	transcription start site region 10879
Tssr10880	1	4496424 to 4496446	22	-	TSS region	transcription start site region 10880
Tssr10881	1	4496449 to 4496476	27	-	TSS region	transcription start site region 10881
Tssr10882	1	4496513 to 4496531	18	-	TSS region	transcription start site region 10882
Gm37587	1	4496551 to 4499558	3007	+	unclassified non-coding RNA gene	predicted gene, 37587
Cpgi5	1	4496763 to 4497717	954		CpG island	CpG island 5
Tssr10883	1	4497366 to 4497391	25	-	TSS region	transcription start site region 10883
Tssr10884	1	4497395 to 4497409	14	-	TSS region	transcription start site region 10884
Tssr5797	1	4522816 to 4522864	48	+	TSS region	transcription start site region 5797
Gm7357	1	4522905 to 4526737	3832	+	pseudogene	predicted gene 7357
Gm22307	1	4529017 to 4529123	106	+	snRNA gene	predicted gene, 22307
Gm38076	1	4534837 to 4535286	449	-	pseudogene	predicted gene, 38076
D1Mit427	1	4536568 to 4536681	113		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 427