Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:43909408-44120034

42 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm24180	1	43918777 to 43918886	109	-	miRNA gene	predicted gene, 24180
Cpgi222	1	43933515 to 43934653	1138		CpG island	CpG island 222
Tssr6550	1	43933608 to 43933626	18	+	TSS region	transcription start site region 6550
Tssr6551	1	43933680 to 43933694	14	+	TSS region	transcription start site region 6551
Tssr11507	1	43933837 to 43933914	77	-	TSS region	transcription start site region 11507
Tpp2	1	43933865 to 44003000	69135	+	protein coding gene	tripeptidyl peptidase II
Tssr6552	1	43933980 to 43934076	96	+	TSS region	transcription start site region 6552
Tssr6553	1	43934757 to 43934761	4	+	TSS region	transcription start site region 6553
Tssr6554	1	43958819 to 43958825	6	+	TSS region	transcription start site region 6554
Tssr6555	1	43969859 to 43969865	6	+	TSS region	transcription start site region 6555
Tssr6556	1	43983179 to 43983193	14	+	TSS region	transcription start site region 6556
Tssr6557	1	43983520 to 43983544	24	+	TSS region	transcription start site region 6557
Tssr6558	1	43985042 to 43985046	4	+	TSS region	transcription start site region 6558
D1Dcr33	1	44007822 to 44007919	97		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 33
Mettl21c	1	44009408 to 44020034	10626	-	protein coding gene	methyltransferase like 21C
Gm15838	1	44018470 to 44018649	179	-	pseudogene	predicted gene 15838
Tssr11508	1	44019929 to 44019940	11	-	TSS region	transcription start site region 11508
Gm8251	1	44055952 to 44061936	5984	-	protein coding gene	predicted gene 8251
Tssr11509	1	44079662 to 44079668	6	-	TSS region	transcription start site region 11509
Tssr11510	1	44079742 to 44079749	7	-	TSS region	transcription start site region 11510
Tex30	1	44086613 to 44102441	15828	-	protein coding gene	testis expressed 30
Gm29247	1	44091463 to 44110790	19327	-	unclassified non-coding RNA gene	predicted gene 29247
Tssr6559	1	44101636 to 44101641	5	+	TSS region	transcription start site region 6559
Tssr11511	1	44101637 to 44101649	12	-	TSS region	transcription start site region 11511
Cpgi223	1	44101644 to 44102766	1122		CpG island	CpG island 223
Tssr11512	1	44101653 to 44101659	6	-	TSS region	transcription start site region 11512
Tssr11513	1	44101661 to 44101673	12	-	TSS region	transcription start site region 11513
Tssr11514	1	44101982 to 44101996	14	-	TSS region	transcription start site region 11514
Tssr11515	1	44102341 to 44102344	3	-	TSS region	transcription start site region 11515
Tssr11516	1	44102377 to 44102398	21	-	TSS region	transcription start site region 11516
Tssr11517	1	44102417 to 44102428	11	-	TSS region	transcription start site region 11517
Tssr11518	1	44102433 to 44102448	15	-	TSS region	transcription start site region 11518
Tssr11519	1	44102470 to 44102475	5	-	TSS region	transcription start site region 11519
Poglut2	1	44106546 to 44118808	12262	-	protein coding gene	protein O-glucosyltransferase 2
Cpgi224	1	44118376 to 44118939	563		CpG island	CpG island 224
Tssr11520	1	44118711 to 44118722	11	-	TSS region	transcription start site region 11520
Tssr11521	1	44118757 to 44118816	59	-	TSS region	transcription start site region 11521
Tssr6560	1	44118951 to 44119009	58	+	TSS region	transcription start site region 6560
Bivm	1	44118962 to 44144771	25809	+	protein coding gene	basic, immunoglobulin-like variable motif containing
Cpgi225	1	44119194 to 44120113	919		CpG island	CpG island 225
Tssr6561	1	44119451 to 44119519	68	+	TSS region	transcription start site region 6561
Tssr6562	1	44119952 to 44119985	33	+	TSS region	transcription start site region 6562