Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:43833865-44103000

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr6549 1 43887986 to 43888008 22 + TSS region transcription start site region 6549
Gm19587 1 43888051 to 43888595 544 + pseudogene predicted gene, 19587
Cpgi221 1 43898063 to 43898323 260 CpG island CpG island 221
Gm8241 1 43898294 to 43899109 815 + pseudogene predicted gene 8241
Gm26352 1 43902928 to 43903052 124 + snoRNA gene predicted gene, 26352
Gm24180 1 43918777 to 43918886 109 - miRNA gene predicted gene, 24180
Cpgi222 1 43933515 to 43934653 1138 CpG island CpG island 222
Tssr6550 1 43933608 to 43933626 18 + TSS region transcription start site region 6550
Tssr6551 1 43933680 to 43933694 14 + TSS region transcription start site region 6551
Tssr11507 1 43933837 to 43933914 77 - TSS region transcription start site region 11507
Tpp2 1 43933865 to 44003000 69135 + protein coding gene tripeptidyl peptidase II
Tssr6552 1 43933980 to 43934076 96 + TSS region transcription start site region 6552
Tssr6553 1 43934757 to 43934761 4 + TSS region transcription start site region 6553
Tssr6554 1 43958819 to 43958825 6 + TSS region transcription start site region 6554
Tssr6555 1 43969859 to 43969865 6 + TSS region transcription start site region 6555
Tssr6556 1 43983179 to 43983193 14 + TSS region transcription start site region 6556
Tssr6557 1 43983520 to 43983544 24 + TSS region transcription start site region 6557
Tssr6558 1 43985042 to 43985046 4 + TSS region transcription start site region 6558
D1Dcr33 1 44007822 to 44007919 97 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 33
Mettl21c 1 44009408 to 44020034 10626 - protein coding gene methyltransferase like 21C
Gm15838 1 44018470 to 44018649 179 - pseudogene predicted gene 15838
Tssr11508 1 44019929 to 44019940 11 - TSS region transcription start site region 11508
Gm8251 1 44055952 to 44061936 5984 - protein coding gene predicted gene 8251
Tssr11509 1 44079662 to 44079668 6 - TSS region transcription start site region 11509
Tssr11510 1 44079742 to 44079749 7 - TSS region transcription start site region 11510
Tex30 1 44086613 to 44102441 15828 - protein coding gene testis expressed 30
Gm29247 1 44091463 to 44110790 19327 - unclassified non-coding RNA gene predicted gene 29247
Tssr6559 1 44101636 to 44101641 5 + TSS region transcription start site region 6559
Tssr11511 1 44101637 to 44101649 12 - TSS region transcription start site region 11511
Cpgi223 1 44101644 to 44102766 1122 CpG island CpG island 223
Tssr11512 1 44101653 to 44101659 6 - TSS region transcription start site region 11512
Tssr11513 1 44101661 to 44101673 12 - TSS region transcription start site region 11513
Tssr11514 1 44101982 to 44101996 14 - TSS region transcription start site region 11514
Tssr11515 1 44102341 to 44102344 3 - TSS region transcription start site region 11515
Tssr11516 1 44102377 to 44102398 21 - TSS region transcription start site region 11516
Tssr11517 1 44102417 to 44102428 11 - TSS region transcription start site region 11517
Tssr11518 1 44102433 to 44102448 15 - TSS region transcription start site region 11518
Tssr11519 1 44102470 to 44102475 5 - TSS region transcription start site region 11519