Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:43793515-44074653

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Uxs1 1 43747850 to 43827819 79969 - protein coding gene UDP-glucuronate decarboxylase 1
Tssr11503 1 43811902 to 43811904 2 - TSS region transcription start site region 11503
Tssr11504 1 43826552 to 43826583 31 - TSS region transcription start site region 11504
Cpgi220 1 43826983 to 43828252 1269 CpG island CpG island 220
Tssr11505 1 43827723 to 43827742 19 - TSS region transcription start site region 11505
Tssr11506 1 43827751 to 43827786 35 - TSS region transcription start site region 11506
Tssr6549 1 43887986 to 43888008 22 + TSS region transcription start site region 6549
Gm19587 1 43888051 to 43888595 544 + pseudogene predicted gene, 19587
Cpgi221 1 43898063 to 43898323 260 CpG island CpG island 221
Gm8241 1 43898294 to 43899109 815 + pseudogene predicted gene 8241
Gm26352 1 43902928 to 43903052 124 + snoRNA gene predicted gene, 26352
Gm24180 1 43918777 to 43918886 109 - miRNA gene predicted gene, 24180
Cpgi222 1 43933515 to 43934653 1138 CpG island CpG island 222
Tssr6550 1 43933608 to 43933626 18 + TSS region transcription start site region 6550
Tssr6551 1 43933680 to 43933694 14 + TSS region transcription start site region 6551
Tssr11507 1 43933837 to 43933914 77 - TSS region transcription start site region 11507
Tpp2 1 43933865 to 44003000 69135 + protein coding gene tripeptidyl peptidase II
Tssr6552 1 43933980 to 43934076 96 + TSS region transcription start site region 6552
Tssr6553 1 43934757 to 43934761 4 + TSS region transcription start site region 6553
Tssr6554 1 43958819 to 43958825 6 + TSS region transcription start site region 6554
Tssr6555 1 43969859 to 43969865 6 + TSS region transcription start site region 6555
Tssr6556 1 43983179 to 43983193 14 + TSS region transcription start site region 6556
Tssr6557 1 43983520 to 43983544 24 + TSS region transcription start site region 6557
Tssr6558 1 43985042 to 43985046 4 + TSS region transcription start site region 6558
D1Dcr33 1 44007822 to 44007919 97 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 33
Mettl21c 1 44009408 to 44020034 10626 - protein coding gene methyltransferase like 21C
Gm15838 1 44018470 to 44018649 179 - pseudogene predicted gene 15838
Tssr11508 1 44019929 to 44019940 11 - TSS region transcription start site region 11508
Gm8251 1 44055952 to 44061936 5984 - protein coding gene predicted gene 8251