MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:43700910-43872188

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm30634	1	43714283 to 43718238	3955	+	lncRNA gene	predicted gene, 30634
Tssr6544	1	43730593 to 43730633	40	+	TSS region	transcription start site region 6544
1500015O10Rik	1	43730602 to 43742564	11962	+	protein coding gene	RIKEN cDNA 1500015O10 gene
Tssr6545	1	43730640 to 43730654	14	+	TSS region	transcription start site region 6545
Tssr6546	1	43730666 to 43730718	52	+	TSS region	transcription start site region 6546
Cpgi219	1	43730674 to 43730909	235		CpG island	CpG island 219
Tssr6547	1	43730788 to 43730799	11	+	TSS region	transcription start site region 6547
Tssr6548	1	43730811 to 43730875	64	+	TSS region	transcription start site region 6548
Gm29155	1	43741961 to 43743895	1934	-	antisense lncRNA gene	predicted gene 29155
Tssr70	1	43742561 to 43742564	3	-	TSS region	transcription start site region 70
Gm29157	1	43742915 to 43743526	611	+	lincRNA gene	predicted gene 29157
Gm29156	1	43745784 to 43746282	498	-	lincRNA gene	predicted gene 29156
Uxs1	1	43747850 to 43827819	79969	-	protein coding gene	UDP-glucuronate decarboxylase 1
Gm16103	1	43785910 to 43787188	1278	+	pseudogene	predicted gene 16103
Tssr11503	1	43811902 to 43811904	2	-	TSS region	transcription start site region 11503
Tssr11504	1	43826552 to 43826583	31	-	TSS region	transcription start site region 11504
Cpgi220	1	43826983 to 43828252	1269		CpG island	CpG island 220
Tssr11505	1	43827723 to 43827742	19	-	TSS region	transcription start site region 11505
Tssr11506	1	43827751 to 43827786	35	-	TSS region	transcription start site region 11506