Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Tgfbrap1 | 1 | 51372 | - | protein coding gene | transforming growth factor, beta receptor associated protein 1 | |
Cpgi213 | 1 | 1342 | CpG island | CpG island 213 | ||
Tssr11467 | 1 | 60 | - | TSS region | transcription start site region 11467 | |
8430432A02Rik | 1 | 1247 | + | antisense lncRNA gene | RIKEN cDNA 8430432A02 gene | |
Cpgi214 | 1 | 711 | CpG island | CpG island 214 | ||
Tssr11468 | 1 | 61 | - | TSS region | transcription start site region 11468 | |
Tssr68 | 1 | 19 | + | TSS region | transcription start site region 68 | |
AI597479 | 1 | 17236 | + | protein coding gene | expressed sequence AI597479 | |
Tssr6522 | 1 | 48 | + | TSS region | transcription start site region 6522 | |
D1Mit477 | 1 | 106 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 477 | ||
Fhl2 | 1 | 73910 | - | protein coding gene | four and a half LIM domains 2 | |
Cpgi215 | 1 | 509 | CpG island | CpG island 215 | ||
Tssr11469 | 1 | 17 | - | TSS region | transcription start site region 11469 | |
Tssr11470 | 1 | 8 | - | TSS region | transcription start site region 11470 | |
Tssr11471 | 1 | 6 | - | TSS region | transcription start site region 11471 | |
Tssr11472 | 1 | 9 | - | TSS region | transcription start site region 11472 | |
Tssr11473 | 1 | 11 | - | TSS region | transcription start site region 11473 | |
Cpgi216 | 1 | 925 | CpG island | CpG island 216 | ||
Tssr11474 | 1 | 11 | - | TSS region | transcription start site region 11474 | |
Tssr11475 | 1 | 14 | - | TSS region | transcription start site region 11475 | |
Tssr11476 | 1 | 16 | - | TSS region | transcription start site region 11476 | |
Tssr11477 | 1 | 71 | - | TSS region | transcription start site region 11477 | |
Tssr11478 | 1 | 22 | - | TSS region | transcription start site region 11478 | |
Tssr11479 | 1 | 5 | - | TSS region | transcription start site region 11479 | |
Tssr11480 | 1 | 27 | - | TSS region | transcription start site region 11480 | |
Tssr11481 | 1 | 27 | - | TSS region | transcription start site region 11481 | |
Tssr11482 | 1 | 25 | - | TSS region | transcription start site region 11482 | |
Tssr11483 | 1 | 13 | - | TSS region | transcription start site region 11483 | |
Tssr11484 | 1 | 8 | - | TSS region | transcription start site region 11484 | |
Tssr11485 | 1 | 9 | - | TSS region | transcription start site region 11485 | |
Tssr11486 | 1 | 14 | - | TSS region | transcription start site region 11486 | |
Tssr11487 | 1 | 20 | - | TSS region | transcription start site region 11487 | |
Tssr11488 | 1 | 11 | - | TSS region | transcription start site region 11488 | |
Tssr11489 | 1 | 3 | - | TSS region | transcription start site region 11489 | |
Tssr11490 | 1 | 8 | - | TSS region | transcription start site region 11490 | |
Tssr11491 | 1 | 10 | - | TSS region | transcription start site region 11491 | |
Tssr11492 | 1 | 21 | - | TSS region | transcription start site region 11492 | |
Tssr11493 | 1 | 6 | - | TSS region | transcription start site region 11493 | |
Tssr6523 | 1 | 15 | + | TSS region | transcription start site region 6523 | |
Gm8210 | 1 | 482 | + | pseudogene | predicted pseudogene 8210 | |
Tssr11494 | 1 | 14 | - | TSS region | transcription start site region 11494 | |
Tssr6524 | 1 | 16 | + | TSS region | transcription start site region 6524 | |
Tssr6525 | 1 | 7 | + | TSS region | transcription start site region 6525 | |
Tssr11495 | 1 | 7 | - | TSS region | transcription start site region 11495 | |
Tssr6526 | 1 | 2 | + | TSS region | transcription start site region 6526 | |
Gm29040 | 1 | 52769 | - | lincRNA gene | predicted gene 29040 | |
Gm29610 | 1 | 452 | + | pseudogene | predicted gene 29610 | |
Tssr11496 | 1 | 11 | - | TSS region | transcription start site region 11496 | |
Tssr69 | 1 | 1 | - | TSS region | transcription start site region 69 | |
D1Mit213 | 1 | 107 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 213 | ||
Tssr11497 | 1 | 8 | - | TSS region | transcription start site region 11497 | |
Gm29041 | 1 | 379 | + | pseudogene | predicted gene 29041 | |
Tssr6527 | 1 | 3 | + | TSS region | transcription start site region 6527 | |
D1Mit375 | 1 | 122 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 375 | ||
Cpgi217 | 1 | 1601 | CpG island | CpG island 217 | ||
Tssr6528 | 1 | 8 | + | TSS region | transcription start site region 6528 | |
Tssr6529 | 1 | 94 | + | TSS region | transcription start site region 6529 | |
Nck2 | 1 | 124767 | + | protein coding gene | non-catalytic region of tyrosine kinase adaptor protein 2 | |
Tssr11498 | 1 | 11 | - | TSS region | transcription start site region 11498 | |
Tssr6530 | 1 | 4 | + | TSS region | transcription start site region 6530 | |
Tssr6531 | 1 | 9 | + | TSS region | transcription start site region 6531 | |
Tssr6532 | 1 | 34 | + | TSS region | transcription start site region 6532 | |
Tssr6533 | 1 | 34 | + | TSS region | transcription start site region 6533 | |
Tssr6534 | 1 | 13 | + | TSS region | transcription start site region 6534 | |
Gm37536 | 1 | 2490 | + | unclassified gene | predicted gene, 37536 | |
Tssr6535 | 1 | 2 | + | TSS region | transcription start site region 6535 | |
D1Mit248 | 1 | 140 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 248 | ||
Tssr11499 | 1 | 4 | - | TSS region | transcription start site region 11499 | |
Tssr6536 | 1 | 6 | + | TSS region | transcription start site region 6536 | |
Tssr11500 | 1 | 5 | - | TSS region | transcription start site region 11500 | |
Tssr11501 | 1 | 41 | - | TSS region | transcription start site region 11501 | |
Tssr6537 | 1 | 8 | + | TSS region | transcription start site region 6537 | |
Tssr6538 | 1 | 10 | + | TSS region | transcription start site region 6538 | |
Tssr6539 | 1 | 15 | + | TSS region | transcription start site region 6539 | |
Tssr6540 | 1 | 14 | + | TSS region | transcription start site region 6540 | |
Tssr11502 | 1 | 10 | - | TSS region | transcription start site region 11502 | |
Tssr6541 | 1 | 41 | + | TSS region | transcription start site region 6541 | |
Tssr6542 | 1 | 24 | + | TSS region | transcription start site region 6542 | |
Cpgi218 | 1 | 268 | CpG island | CpG island 218 | ||
Gm38228 | 1 | 1292 | + | unclassified gene | predicted gene, 38228 | |
Tssr6543 | 1 | 8 | + | TSS region | transcription start site region 6543 | |
Gm38628 | 1 | 15554 | + | lncRNA gene | predicted gene, 38628 | |
Gm30634 | 1 | 3955 | + | lncRNA gene | predicted gene, 30634 | |
Tssr6544 | 1 | 40 | + | TSS region | transcription start site region 6544 | |
1500015O10Rik | 1 | 11962 | + | protein coding gene | RIKEN cDNA 1500015O10 gene | |
Tssr6545 | 1 | 14 | + | TSS region | transcription start site region 6545 | |
Tssr6546 | 1 | 52 | + | TSS region | transcription start site region 6546 | |
Cpgi219 | 1 | 235 | CpG island | CpG island 219 | ||
Tssr6547 | 1 | 11 | + | TSS region | transcription start site region 6547 | |
Tssr6548 | 1 | 64 | + | TSS region | transcription start site region 6548 | |
Gm29155 | 1 | 1934 | - | antisense lncRNA gene | predicted gene 29155 | |
Tssr70 | 1 | 3 | - | TSS region | transcription start site region 70 | |
Gm29157 | 1 | 611 | + | lincRNA gene | predicted gene 29157 | |
Gm29156 | 1 | 498 | - | lincRNA gene | predicted gene 29156 | |
Uxs1 | 1 | 79969 | - | protein coding gene | UDP-glucuronate decarboxylase 1 | |
Gm16103 | 1 | 1278 | + | pseudogene | predicted gene 16103 | |
Tssr11503 | 1 | 2 | - | TSS region | transcription start site region 11503 | |
Tssr11504 | 1 | 31 | - | TSS region | transcription start site region 11504 | |
Cpgi220 | 1 | 1269 | CpG island | CpG island 220 | ||
Tssr11505 | 1 | 19 | - | TSS region | transcription start site region 11505 | |
Tssr11506 | 1 | 35 | - | TSS region | transcription start site region 11506 | |
Tssr6549 | 1 | 22 | + | TSS region | transcription start site region 6549 | |
Gm19587 | 1 | 544 | + | pseudogene | predicted gene, 19587 | |
Cpgi221 | 1 | 260 | CpG island | CpG island 221 | ||
Gm8241 | 1 | 815 | + | pseudogene | predicted gene 8241 | |
Gm26352 | 1 | 124 | + | snoRNA gene | predicted gene, 26352 | |
Gm24180 | 1 | 109 | - | miRNA gene | predicted gene, 24180 | |
Cpgi222 | 1 | 1138 | CpG island | CpG island 222 | ||
Tssr6550 | 1 | 18 | + | TSS region | transcription start site region 6550 | |
Tssr6551 | 1 | 14 | + | TSS region | transcription start site region 6551 | |
Tssr11507 | 1 | 77 | - | TSS region | transcription start site region 11507 | |
Tpp2 | 1 | 69135 | + | protein coding gene | tripeptidyl peptidase II | |
Tssr6552 | 1 | 96 | + | TSS region | transcription start site region 6552 | |
Tssr6553 | 1 | 4 | + | TSS region | transcription start site region 6553 | |
Tssr6554 | 1 | 6 | + | TSS region | transcription start site region 6554 | |
Tssr6555 | 1 | 6 | + | TSS region | transcription start site region 6555 | |
Tssr6556 | 1 | 14 | + | TSS region | transcription start site region 6556 | |
Tssr6557 | 1 | 24 | + | TSS region | transcription start site region 6557 | |
Tssr6558 | 1 | 4 | + | TSS region | transcription start site region 6558 | |
D1Dcr33 | 1 | 97 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 33 | ||
Mettl21c | 1 | 10626 | - | protein coding gene | methyltransferase like 21C | |
Gm15838 | 1 | 179 | - | pseudogene | predicted gene 15838 | |
Tssr11508 | 1 | 11 | - | TSS region | transcription start site region 11508 | |
Gm8251 | 1 | 5984 | - | protein coding gene | predicted gene 8251 | |
Tssr11509 | 1 | 6 | - | TSS region | transcription start site region 11509 | |
Tssr11510 | 1 | 7 | - | TSS region | transcription start site region 11510 | |
Tex30 | 1 | 15828 | - | protein coding gene | testis expressed 30 | |
Gm29247 | 1 | 19327 | - | unclassified non-coding RNA gene | predicted gene 29247 | |
Tssr6559 | 1 | 5 | + | TSS region | transcription start site region 6559 | |
Tssr11511 | 1 | 12 | - | TSS region | transcription start site region 11511 | |
Cpgi223 | 1 | 1122 | CpG island | CpG island 223 | ||
Tssr11512 | 1 | 6 | - | TSS region | transcription start site region 11512 | |
Tssr11513 | 1 | 12 | - | TSS region | transcription start site region 11513 | |
Tssr11514 | 1 | 14 | - | TSS region | transcription start site region 11514 | |
Tssr11515 | 1 | 3 | - | TSS region | transcription start site region 11515 | |
Tssr11516 | 1 | 21 | - | TSS region | transcription start site region 11516 | |
Tssr11517 | 1 | 11 | - | TSS region | transcription start site region 11517 | |
Tssr11518 | 1 | 15 | - | TSS region | transcription start site region 11518 | |
Tssr11519 | 1 | 5 | - | TSS region | transcription start site region 11519 | |
Poglut2 | 1 | 12262 | - | protein coding gene | protein O-glucosyltransferase 2 | |
Cpgi224 | 1 | 563 | CpG island | CpG island 224 | ||
Tssr11520 | 1 | 11 | - | TSS region | transcription start site region 11520 | |
Tssr11521 | 1 | 59 | - | TSS region | transcription start site region 11521 | |
Tssr6560 | 1 | 58 | + | TSS region | transcription start site region 6560 | |
Bivm | 1 | 25809 | + | protein coding gene | basic, immunoglobulin-like variable motif containing | |
Cpgi225 | 1 | 919 | CpG island | CpG island 225 | ||
Tssr6561 | 1 | 68 | + | TSS region | transcription start site region 6561 | |
Tssr6562 | 1 | 33 | + | TSS region | transcription start site region 6562 | |
Tssr6563 | 1 | 14 | + | TSS region | transcription start site region 6563 | |
Cpgi226 | 1 | 851 | CpG island | CpG island 226 | ||
Ercc5 | 1 | 33516 | + | protein coding gene | excision repair cross-complementing rodent repair deficiency, complementation group 5 | |
Shm3 | 1 | 18759979 | QTL | sperm head morphology 3 | ||
Shm1 | 1 | 6630032 | QTL | sperm head morphology 1 | ||
Tssr6564 | 1 | 61 | + | TSS region | transcription start site region 6564 | |
Tssr6565 | 1 | 15 | + | TSS region | transcription start site region 6565 | |
Tssr6566 | 1 | 46 | + | TSS region | transcription start site region 6566 | |
Tssr71 | 1 | 15 | + | TSS region | transcription start site region 71 | |
Cpgi227 | 1 | 542 | CpG island | CpG island 227 | ||
Mettl21e | 1 | 14861 | - | protein coding gene | methyltransferase like 21E | |
Tssr6567 | 1 | 10 | + | TSS region | transcription start site region 6567 | |
Gm15833 | 1 | 956 | + | pseudogene | predicted gene 15833 | |
Tssr11522 | 1 | 46 | - | TSS region | transcription start site region 11522 | |
Tssr11523 | 1 | 9 | - | TSS region | transcription start site region 11523 | |
Gm5700 | 1 | 987 | - | pseudogene | predicted gene 5700 | |
D1Dcr34 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 34 | ||
D1Dcr35 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 35 | ||
Gm28893 | 1 | 1002 | + | lncRNA gene | predicted gene 28893 | |
Txn-ps1 | 1 | 308 | - | pseudogene | thioredoxin, pseudogene 1 | |
Gm39635 | 1 | 28893 | - | lncRNA gene | predicted gene, 39635 | |
Tssr6568 | 1 | 16 | + | TSS region | transcription start site region 6568 | |
Gulp1 | 1 | 245327 | + | protein coding gene | GULP, engulfment adaptor PTB domain containing 1 | |
Tssr6569 | 1 | 6 | + | TSS region | transcription start site region 6569 | |
Cpgi228 | 1 | 971 | CpG island | CpG island 228 | ||
Tssr6570 | 1 | 54 | + | TSS region | transcription start site region 6570 | |
Tssr6571 | 1 | 3 | + | TSS region | transcription start site region 6571 | |
Tssr6572 | 1 | 7 | + | TSS region | transcription start site region 6572 | |
Tssr6573 | 1 | 10 | + | TSS region | transcription start site region 6573 | |
Gm37626 | 1 | 4562 | + | unclassified gene | predicted gene, 37626 |