Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:43048710-43165946

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tgfbrap1	1	43047265 to 43098637	51372	-	protein coding gene	transforming growth factor, beta receptor associated protein 1
Gm28782	1	43056267 to 43057134	867	+	antisense lncRNA gene	predicted gene 28782
Cpgi213	1	43091656 to 43092998	1342		CpG island	CpG island 213
Tssr11467	1	43092438 to 43092498	60	-	TSS region	transcription start site region 11467
8430432A02Rik	1	43092588 to 43093835	1247	+	antisense lncRNA gene	RIKEN cDNA 8430432A02 gene
Cpgi214	1	43098348 to 43099059	711		CpG island	CpG island 214
Tssr11468	1	43098625 to 43098686	61	-	TSS region	transcription start site region 11468
Tssr68	1	43098692 to 43098711	19	+	TSS region	transcription start site region 68
AI597479	1	43098710 to 43115946	17236	+	protein coding gene	expressed sequence AI597479
Tssr6522	1	43098712 to 43098760	48	+	TSS region	transcription start site region 6522
D1Mit477	1	43119939 to 43120045	106		DNA segment	DNA Segment, Chr 1 Massachusetts Institute of Technology 477
Fhl2	1	43123074 to 43196984	73910	-	protein coding gene	four and a half LIM domains 2
Cpgi215	1	43123472 to 43123981	509		CpG island	CpG island 215
Tssr11469	1	43141855 to 43141872	17	-	TSS region	transcription start site region 11469
Tssr11470	1	43145561 to 43145569	8	-	TSS region	transcription start site region 11470
Tssr11471	1	43159186 to 43159192	6	-	TSS region	transcription start site region 11471
Tssr11472	1	43160080 to 43160089	9	-	TSS region	transcription start site region 11472
Tssr11473	1	43162001 to 43162012	11	-	TSS region	transcription start site region 11473
Cpgi216	1	43163480 to 43164405	925		CpG island	CpG island 216
Tssr11474	1	43163821 to 43163832	11	-	TSS region	transcription start site region 11474
Tssr11475	1	43163847 to 43163861	14	-	TSS region	transcription start site region 11475
Tssr11476	1	43163874 to 43163890	16	-	TSS region	transcription start site region 11476
Tssr11477	1	43163891 to 43163962	71	-	TSS region	transcription start site region 11477
Tssr11478	1	43164077 to 43164099	22	-	TSS region	transcription start site region 11478