Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:42746233-43010683

16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dalir	1	42750712 to 42752881	2169	+	lincRNA gene	DNMT1 associated long intergenic non-coding RNA
Gm46091	1	42762307 to 42774147	11840	+	lncRNA gene	predicted gene, 46091
Cpgi209	1	42780500 to 42780667	167		CpG island	CpG island 209
Cpgi210	1	42850970 to 42851892	922		CpG island	CpG island 210
Mrps9	1	42851233 to 42905683	54450	+	protein coding gene	mitochondrial ribosomal protein S9
Tssr6517	1	42851253 to 42851295	42	+	TSS region	transcription start site region 6517
Gm23126	1	42866685 to 42866818	133	-	snoRNA gene	predicted gene, 23126
Gm39633	1	42936623 to 42952667	16044	-	lncRNA gene	predicted gene, 39633
Cpgi211	1	42952739 to 42953784	1045		CpG island	CpG island 211
Gpr45	1	42952872 to 43035451	82579	+	protein coding gene	G protein-coupled receptor 45
Tssr6518	1	42952949 to 42952983	34	+	TSS region	transcription start site region 6518
Tssr6519	1	42952984 to 42953028	44	+	TSS region	transcription start site region 6519
Tssr6520	1	42953106 to 42953164	58	+	TSS region	transcription start site region 6520
Tssr6521	1	42954135 to 42954141	6	+	TSS region	transcription start site region 6521
Gm3418	1	42998978 to 42999477	499	-	pseudogene	predicted gene 3418
V125Dq1	1	43000000 to 43000000	0		QTL	vitamin D active form serum level QTL 1