Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Pantr1 | 1 | 46625 | - | lincRNA gene | POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1 | |
Gm42411 | 1 | 14200 | + | lncRNA gene | predicted gene 42411 | |
Cpgi203 | 1 | 887 | CpG island | CpG island 203 | ||
Cpgi204 | 1 | 829 | CpG island | CpG island 204 | ||
Tssr11456 | 1 | 11 | - | TSS region | transcription start site region 11456 | |
Tssr11457 | 1 | 20 | - | TSS region | transcription start site region 11457 | |
Tssr11458 | 1 | 11 | - | TSS region | transcription start site region 11458 | |
Cpgi205 | 1 | 1361 | CpG island | CpG island 205 | ||
Tssr6508 | 1 | 6 | + | TSS region | transcription start site region 6508 | |
Tssr11459 | 1 | 64 | - | TSS region | transcription start site region 11459 | |
Tssr6509 | 1 | 49 | + | TSS region | transcription start site region 6509 | |
Gm20646 | 1 | 49866 | + | sense overlapping lncRNA gene | predicted gene 20646 | |
Tssr6510 | 1 | 34 | + | TSS region | transcription start site region 6510 | |
Tssr11460 | 1 | 66 | - | TSS region | transcription start site region 11460 | |
Tssr11461 | 1 | 13 | - | TSS region | transcription start site region 11461 | |
Tssr11462 | 1 | 11 | - | TSS region | transcription start site region 11462 | |
Tssr11463 | 1 | 45 | - | TSS region | transcription start site region 11463 | |
Cpgi206 | 1 | 3690 | CpG island | CpG island 206 | ||
D1Mit228.1 | 1 | 135 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 228.1 | ||
Tssr6511 | 1 | 7 | + | TSS region | transcription start site region 6511 | |
Tssr6512 | 1 | 47 | + | TSS region | transcription start site region 6512 | |
Tssr6513 | 1 | 11 | + | TSS region | transcription start site region 6513 | |
D1Mit228 | 1 | 128 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 228 | ||
Pou3f3 | 1 | 3064 | + | protein coding gene | POU domain, class 3, transcription factor 3 | |
Tssr6514 | 1 | 11 | + | TSS region | transcription start site region 6514 | |
Tssr6515 | 1 | 19 | + | TSS region | transcription start site region 6515 | |
2900092D14Rik | 1 | 2840 | + | lncRNA gene | RIKEN cDNA 2900092D14 gene | |
Tssr6516 | 1 | 4 | + | TSS region | transcription start site region 6516 | |
D1Mit246 | 1 | 146 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 246 | ||
Pantr2 | 1 | 6393 | - | lncRNA gene | POU domain, class 3, transcription factor 3 adjacent noncoding transcript 2 | |
Tssr11464 | 1 | 3 | - | TSS region | transcription start site region 11464 | |
Cpgi207 | 1 | 638 | CpG island | CpG island 207 | ||
Tssr11465 | 1 | 12 | - | TSS region | transcription start site region 11465 | |
Tssr11466 | 1 | 6 | - | TSS region | transcription start site region 11466 | |
Cpgi208 | 1 | 196 | CpG island | CpG island 208 | ||
Gm46090 | 1 | 5944 | + | lncRNA gene | predicted gene, 46090 | |
Dalir | 1 | 2169 | + | lincRNA gene | DNMT1 associated long intergenic non-coding RNA | |
Gm46091 | 1 | 11840 | + | lncRNA gene | predicted gene, 46091 | |
Cpgi209 | 1 | 167 | CpG island | CpG island 209 | ||
Cpgi210 | 1 | 922 | CpG island | CpG island 210 | ||
Mrps9 | 1 | 54450 | + | protein coding gene | mitochondrial ribosomal protein S9 | |
Tssr6517 | 1 | 42 | + | TSS region | transcription start site region 6517 | |
Gm23126 | 1 | 133 | - | snoRNA gene | predicted gene, 23126 | |
Gm39633 | 1 | 16044 | - | lncRNA gene | predicted gene, 39633 | |
Cpgi211 | 1 | 1045 | CpG island | CpG island 211 | ||
Gpr45 | 1 | 82579 | + | protein coding gene | G protein-coupled receptor 45 | |
Tssr6518 | 1 | 34 | + | TSS region | transcription start site region 6518 | |
Tssr6519 | 1 | 44 | + | TSS region | transcription start site region 6519 | |
Tssr6520 | 1 | 58 | + | TSS region | transcription start site region 6520 | |
Tssr6521 | 1 | 6 | + | TSS region | transcription start site region 6521 | |
Gm3418 | 1 | 499 | - | pseudogene | predicted gene 3418 | |
V125Dq1 | 1 | 0 | QTL | vitamin D active form serum level QTL 1 | ||
Cpgi212 | 1 | 841 | CpG island | CpG island 212 | ||
Gm24001 | 1 | 84 | + | miRNA gene | predicted gene, 24001 | |
Tgfbrap1 | 1 | 51372 | - | protein coding gene | transforming growth factor, beta receptor associated protein 1 | |
Gm28782 | 1 | 867 | + | antisense lncRNA gene | predicted gene 28782 | |
Cpgi213 | 1 | 1342 | CpG island | CpG island 213 | ||
Tssr11467 | 1 | 60 | - | TSS region | transcription start site region 11467 | |
8430432A02Rik | 1 | 1247 | + | antisense lncRNA gene | RIKEN cDNA 8430432A02 gene | |
Cpgi214 | 1 | 711 | CpG island | CpG island 214 | ||
Tssr11468 | 1 | 61 | - | TSS region | transcription start site region 11468 | |
Tssr68 | 1 | 19 | + | TSS region | transcription start site region 68 | |
AI597479 | 1 | 17236 | + | protein coding gene | expressed sequence AI597479 | |
Tssr6522 | 1 | 48 | + | TSS region | transcription start site region 6522 | |
D1Mit477 | 1 | 106 | DNA segment | DNA Segment, Chr 1 Massachusetts Institute of Technology 477 | ||
Fhl2 | 1 | 73910 | - | protein coding gene | four and a half LIM domains 2 | |
Cpgi215 | 1 | 509 | CpG island | CpG island 215 | ||
Tssr11469 | 1 | 17 | - | TSS region | transcription start site region 11469 | |
Tssr11470 | 1 | 8 | - | TSS region | transcription start site region 11470 | |
Tssr11471 | 1 | 6 | - | TSS region | transcription start site region 11471 | |
Tssr11472 | 1 | 9 | - | TSS region | transcription start site region 11472 | |
Tssr11473 | 1 | 11 | - | TSS region | transcription start site region 11473 | |
Cpgi216 | 1 | 925 | CpG island | CpG island 216 | ||
Tssr11474 | 1 | 11 | - | TSS region | transcription start site region 11474 | |
Tssr11475 | 1 | 14 | - | TSS region | transcription start site region 11475 | |
Tssr11476 | 1 | 16 | - | TSS region | transcription start site region 11476 | |
Tssr11477 | 1 | 71 | - | TSS region | transcription start site region 11477 | |
Tssr11478 | 1 | 22 | - | TSS region | transcription start site region 11478 | |
Tssr11479 | 1 | 5 | - | TSS region | transcription start site region 11479 | |
Tssr11480 | 1 | 27 | - | TSS region | transcription start site region 11480 | |
Tssr11481 | 1 | 27 | - | TSS region | transcription start site region 11481 | |
Tssr11482 | 1 | 25 | - | TSS region | transcription start site region 11482 | |
Tssr11483 | 1 | 13 | - | TSS region | transcription start site region 11483 | |
Tssr11484 | 1 | 8 | - | TSS region | transcription start site region 11484 | |
Tssr11485 | 1 | 9 | - | TSS region | transcription start site region 11485 | |
Tssr11486 | 1 | 14 | - | TSS region | transcription start site region 11486 | |
Tssr11487 | 1 | 20 | - | TSS region | transcription start site region 11487 | |
Tssr11488 | 1 | 11 | - | TSS region | transcription start site region 11488 | |
Tssr11489 | 1 | 3 | - | TSS region | transcription start site region 11489 | |
Tssr11490 | 1 | 8 | - | TSS region | transcription start site region 11490 | |
Tssr11491 | 1 | 10 | - | TSS region | transcription start site region 11491 | |
Tssr11492 | 1 | 21 | - | TSS region | transcription start site region 11492 | |
Tssr11493 | 1 | 6 | - | TSS region | transcription start site region 11493 | |
Tssr6523 | 1 | 15 | + | TSS region | transcription start site region 6523 | |
Gm8210 | 1 | 482 | + | pseudogene | predicted pseudogene 8210 | |
Tssr11494 | 1 | 14 | - | TSS region | transcription start site region 11494 | |
Tssr6524 | 1 | 16 | + | TSS region | transcription start site region 6524 | |
Tssr6525 | 1 | 7 | + | TSS region | transcription start site region 6525 | |
Tssr11495 | 1 | 7 | - | TSS region | transcription start site region 11495 | |
Tssr6526 | 1 | 2 | + | TSS region | transcription start site region 6526 | |
Gm29040 | 1 | 52769 | - | lincRNA gene | predicted gene 29040 | |
Gm29610 | 1 | 452 | + | pseudogene | predicted gene 29610 | |
Tssr11496 | 1 | 11 | - | TSS region | transcription start site region 11496 | |
Tssr69 | 1 | 1 | - | TSS region | transcription start site region 69 | |
D1Mit213 | 1 | 107 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 213 | ||
Tssr11497 | 1 | 8 | - | TSS region | transcription start site region 11497 | |
Gm29041 | 1 | 379 | + | pseudogene | predicted gene 29041 | |
Tssr6527 | 1 | 3 | + | TSS region | transcription start site region 6527 | |
D1Mit375 | 1 | 122 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 375 | ||
Cpgi217 | 1 | 1601 | CpG island | CpG island 217 | ||
Tssr6528 | 1 | 8 | + | TSS region | transcription start site region 6528 | |
Tssr6529 | 1 | 94 | + | TSS region | transcription start site region 6529 | |
Nck2 | 1 | 124767 | + | protein coding gene | non-catalytic region of tyrosine kinase adaptor protein 2 | |
Tssr11498 | 1 | 11 | - | TSS region | transcription start site region 11498 | |
Tssr6530 | 1 | 4 | + | TSS region | transcription start site region 6530 | |
Tssr6531 | 1 | 9 | + | TSS region | transcription start site region 6531 | |
Tssr6532 | 1 | 34 | + | TSS region | transcription start site region 6532 | |
Tssr6533 | 1 | 34 | + | TSS region | transcription start site region 6533 | |
Tssr6534 | 1 | 13 | + | TSS region | transcription start site region 6534 | |
Gm37536 | 1 | 2490 | + | unclassified gene | predicted gene, 37536 | |
Tssr6535 | 1 | 2 | + | TSS region | transcription start site region 6535 | |
D1Mit248 | 1 | 140 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 248 |