MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:42611324-42691328

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14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm30248	1	42598931 to 42641594	42663	-	lncRNA gene	predicted gene, 30248
D1Mit517	1	42627598 to 42627715	117		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology-517
Pantr1	1	42648200 to 42694825	46625	-	lincRNA gene	POU domain, class 3, transcription factor 3 adjacent noncoding transcript 1
Tssr11451	1	42651324 to 42651328	4	-	TSS region	transcription start site region 11451
4930420N18Rik	1	42651726 to 42652401	675	+	unclassified gene	RIKEN cDNA 4930420N18 gene
Tssr11452	1	42654492 to 42654497	5	-	TSS region	transcription start site region 11452
D1Mit433	1	42659196 to 42659320	124		DNA segment	DNA Segment, Chr 1, Massachusetts Institute of Technology 433
Tssr11453	1	42665076 to 42665086	10	-	TSS region	transcription start site region 11453
Tssr11454	1	42667638 to 42667673	35	-	TSS region	transcription start site region 11454
Tssr67	1	42672789 to 42672815	26	+	TSS region	transcription start site region 67
Tssr11455	1	42681432 to 42681435	3	-	TSS region	transcription start site region 11455
Gm42411	1	42682365 to 42696565	14200	+	lncRNA gene	predicted gene 42411
Cpgi203	1	42684253 to 42685140	887		CpG island	CpG island 203
Cpgi204	1	42686176 to 42687005	829		CpG island	CpG island 204