Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:4190846-4509266

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm38717	1	4115673 to 4243365	127692	-	protein coding gene	predicted gene, 38717
D1Mit242.1	1	4195036 to 4195150	114		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 242.1
D1Mit242	1	4195172 to 4195255	83		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 242
Gm6101	1	4256234 to 4260519	4285	-	pseudogene	predicted gene 6101
Rp1	1	4290846 to 4409266	118420	-	protein coding gene	retinitis pigmentosa 1 (human)
Cpgi3	1	4352320 to 4352566	246		CpG island	CpG island 3
Tssr10872	1	4360237 to 4360246	9	-	TSS region	transcription start site region 10872
Tssr10873	1	4360256 to 4360312	56	-	TSS region	transcription start site region 10873
Gm37483	1	4363346 to 4364829	1483	-	unclassified gene	predicted gene, 37483
Tssr10874	1	4409223 to 4409240	17	-	TSS region	transcription start site region 10874
Tssr10875	1	4409247 to 4409275	28	-	TSS region	transcription start site region 10875
Tssr10876	1	4409278 to 4409290	12	-	TSS region	transcription start site region 10876
Sox17	1	4490931 to 4497354	6423	-	protein coding gene	SRY (sex determining region Y)-box 17
Cpgi4	1	4491620 to 4493791	2171		CpG island	CpG island 4
Tssr10877	1	4493598 to 4493614	16	-	TSS region	transcription start site region 10877
Tssr10878	1	4496372 to 4496389	17	-	TSS region	transcription start site region 10878
Tssr10879	1	4496400 to 4496420	20	-	TSS region	transcription start site region 10879
Tssr10880	1	4496424 to 4496446	22	-	TSS region	transcription start site region 10880
Tssr10881	1	4496449 to 4496476	27	-	TSS region	transcription start site region 10881
Tssr10882	1	4496513 to 4496531	18	-	TSS region	transcription start site region 10882
Gm37587	1	4496551 to 4499558	3007	+	unclassified non-coding RNA gene	predicted gene, 37587
Cpgi5	1	4496763 to 4497717	954		CpG island	CpG island 5
Tssr10883	1	4497366 to 4497391	25	-	TSS region	transcription start site region 10883
Tssr10884	1	4497395 to 4497409	14	-	TSS region	transcription start site region 10884