Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:41052887-42453086

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930448I06Rik 1 41167587 to 41181252 13665 - lincRNA gene RIKEN cDNA 4930448I06 gene
D1Mit247 1 41173577 to 41173704 127 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 247
Gm39631 1 41495622 to 41533313 37691 - lncRNA gene predicted gene, 39631
D1Mit173 1 41503591 to 41503736 145 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 173
D1Mit173.1 1 41503660 to 41503818 158 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 173.1
Gm28634 1 41526931 to 41529543 2612 - lincRNA gene predicted gene 28634
Tssr11449 1 41533307 to 41533314 7 - TSS region transcription start site region 11449
Gm35935 1 41570307 to 41573501 3194 - lncRNA gene predicted gene, 35935
Tssr66 1 41743569 to 41743588 19 + TSS region transcription start site region 66
Tssr6504 1 41743676 to 41743698 22 + TSS region transcription start site region 6504
Tssr6505 1 41743729 to 41743741 12 + TSS region transcription start site region 6505
D1Ertd84e 1 41752887 to 41753086 199 DNA segment DNA segment, Chr 1, ERATO Doi 84, expressed
Gm29260 1 41781808 to 41939560 157752 + lincRNA gene predicted gene 29260
D1Mit476 1 41877291 to 41877509 218 DNA segment DNA Segment, Chr 1 Massachusetts Institute of Technology 476
D1Mit1013 1 42007286 to 42007434 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 1013
Gm5267 1 42103289 to 42104333 1044 + pseudogene predicted gene 5267
Gm8176 1 42179290 to 42180388 1098 - pseudogene predicted gene 8176
Gm9915 1 42229726 to 42231108 1382 + lincRNA gene predicted gene 9915
Gm29664 1 42238233 to 42238695 462 - lincRNA gene predicted gene 29664
Tssr6506 1 42259803 to 42259810 7 + TSS region transcription start site region 6506
Gm28175 1 42261855 to 42304412 42557 + lincRNA gene predicted gene 28175
Tssr6507 1 42261923 to 42261969 46 + TSS region transcription start site region 6507
Cpgi200 1 42261956 to 42262166 210 CpG island CpG island 200
Gm28140 1 42324590 to 42355937 31347 - lincRNA gene predicted gene 28140
Gm46088 1 42331816 to 42350940 19124 - lncRNA gene predicted gene, 46088
Gm36678 1 42399266 to 42427644 28378 - lncRNA gene predicted gene, 36678
Cpgi201 1 42416072 to 42416265 193 CpG island CpG island 201