Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:40235586-40415609

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il1r1 1 40225014 to 40316201 91187 + protein coding gene interleukin 1 receptor, type I
Tssr6421 1 40237215 to 40237225 10 + TSS region transcription start site region 6421
Gm38070 1 40238020 to 40244499 6479 + unclassified gene predicted gene, 38070
Tssr6422 1 40240970 to 40240971 1 + TSS region transcription start site region 6422
Tssr6423 1 40250969 to 40250995 26 + TSS region transcription start site region 6423
D1Mit232 1 40262417 to 40262558 141 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 232
Sagg 1 40262417 to 45874398 5611981 heritable phenotypic marker saggy
Cpgi195 1 40266404 to 40266937 533 CpG island CpG island 195
Tssr63 1 40266539 to 40266557 18 + TSS region transcription start site region 63
Tssr6424 1 40266578 to 40266659 81 + TSS region transcription start site region 6424
Tssr6425 1 40324570 to 40324623 53 + TSS region transcription start site region 6425
Il1rl2 1 40324610 to 40367562 42952 + protein coding gene interleukin 1 receptor-like 2
Cpgi196 1 40325509 to 40326183 674 CpG island CpG island 196
Tssr6426 1 40325586 to 40325609 23 + TSS region transcription start site region 6426
Gm17970 1 40353852 to 40354536 684 + pseudogene predicted gene, 17970
Tssr6427 1 40356253 to 40356273 20 + TSS region transcription start site region 6427
Tssr64 1 40359163 to 40359169 6 + TSS region transcription start site region 64
Tssr6428 1 40363829 to 40363838 9 + TSS region transcription start site region 6428
Tssr6429 1 40380568 to 40380586 18 + TSS region transcription start site region 6429
Tssr11418 1 40381069 to 40381099 30 - TSS region transcription start site region 11418
Tssr6430 1 40381279 to 40381295 16 + TSS region transcription start site region 6430
Tssr6431 1 40381463 to 40381474 11 + TSS region transcription start site region 6431
Tssr11419 1 40382492 to 40382497 5 - TSS region transcription start site region 11419
Tssr11420 1 40393314 to 40393319 5 - TSS region transcription start site region 11420
Tssr11421 1 40397473 to 40397503 30 - TSS region transcription start site region 11421
Tssr11422 1 40397507 to 40397518 11 - TSS region transcription start site region 11422
Tssr11423 1 40397528 to 40397539 11 - TSS region transcription start site region 11423
Tssr11424 1 40398451 to 40398455 4 - TSS region transcription start site region 11424
Tssr6432 1 40398582 to 40398611 29 + TSS region transcription start site region 6432
Tssr6433 1 40399834 to 40399845 11 + TSS region transcription start site region 6433
Tssr6434 1 40399865 to 40399879 14 + TSS region transcription start site region 6434
Tssr6435 1 40404927 to 40404937 10 + TSS region transcription start site region 6435
Tssr6436 1 40404939 to 40404950 11 + TSS region transcription start site region 6436
Tssr6437 1 40404959 to 40404974 15 + TSS region transcription start site region 6437
Tssr6438 1 40405686 to 40405687 1 + TSS region transcription start site region 6438