Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:39934899-40084939

Filter by:
21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map4k4 1 39900913 to 40026310 125397 + protein coding gene mitogen-activated protein kinase kinase kinase kinase 4
Cpgi192 1 39935755 to 39935983 228 CpG island CpG island 192
Cpgi193 1 39936257 to 39936794 537 CpG island CpG island 193
Tssr6403 1 39971366 to 39971367 1 + TSS region transcription start site region 6403
Tssr6404 1 39986624 to 39986633 9 + TSS region transcription start site region 6404
D1Mit212 1 39992995 to 39993140 145 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 212
Tssr6405 1 40009816 to 40009831 15 + TSS region transcription start site region 6405
Tssr6406 1 40009899 to 40009939 40 + TSS region transcription start site region 6406
Tssr6407 1 40010045 to 40010063 18 + TSS region transcription start site region 6407
Tssr6408 1 40025364 to 40025388 24 + TSS region transcription start site region 6408
Tssr6409 1 40028793 to 40028801 8 + TSS region transcription start site region 6409
4930456G14Rik 1 40049039 to 40050368 1329 - unclassified gene RIKEN cDNA 4930456G14 gene
Tssr6410 1 40059348 to 40059351 3 + TSS region transcription start site region 6410
Gm16894 1 40076228 to 40085851 9623 - antisense lncRNA gene predicted gene, 16894
Tssr61 1 40079374 to 40079376 2 + TSS region transcription start site region 61
D1Mit320 1 40079689 to 40079778 89 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 320
Il1r2 1 40083308 to 40125230 41922 + protein coding gene interleukin 1 receptor, type II
Tssr62 1 40084710 to 40084717 7 + TSS region transcription start site region 62
Tssr6411 1 40084733 to 40084749 16 + TSS region transcription start site region 6411
Tssr6412 1 40084764 to 40084770 6 + TSS region transcription start site region 6412
Tssr6413 1 40084775 to 40084784 9 + TSS region transcription start site region 6413