MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 1:39620299-39765989

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Creg2	1	39618406 to 39651182	32776	-	protein coding gene	cellular repressor of E1A-stimulated genes 2
Tssr11403	1	39621197 to 39621209	12	-	TSS region	transcription start site region 11403
Tssr11404	1	39629450 to 39629456	6	-	TSS region	transcription start site region 11404
Cpgi189	1	39650128 to 39651410	1282		CpG island	CpG island 189
D930019O06Rik	1	39650176 to 39657390	7214	+	antisense lncRNA gene	RIKEN cDNA D930019O06
Tssr6392	1	39650600 to 39650609	9	+	TSS region	transcription start site region 6392
Tssr6393	1	39650727 to 39650738	11	+	TSS region	transcription start site region 6393
Tssr11405	1	39650854 to 39650887	33	-	TSS region	transcription start site region 11405
Tssr11406	1	39650940 to 39650991	51	-	TSS region	transcription start site region 11406
Tssr11407	1	39651165 to 39651196	31	-	TSS region	transcription start site region 11407
Tssr11408	1	39651282 to 39651321	39	-	TSS region	transcription start site region 11408
Rfx8	1	39665299 to 39720989	55690	-	protein coding gene	regulatory factor X 8
D1Ertd259e	1	39682951 to 39683200	249		DNA segment	DNA segment, Chr 1, ERATO Doi 259, expressed
Cpgi190	1	39720598 to 39721183	585		CpG island	CpG island 190
Tssr11409	1	39720960 to 39720975	15	-	TSS region	transcription start site region 11409
Tssr11410	1	39720989 to 39721015	26	-	TSS region	transcription start site region 11410
Tssr11411	1	39739057 to 39739060	3	-	TSS region	transcription start site region 11411
D1Dcr32	1	39764977 to 39765072	95		DNA segment	DNA Segment, Chr 1, Derry C. Roopenian 32