Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:39557340-39597427

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf149 1 39551296 to 39577405 26109 - protein coding gene ring finger protein 149
Tssr11387 1 39557819 to 39557829 10 - TSS region transcription start site region 11387
Tssr11388 1 39558301 to 39558325 24 - TSS region transcription start site region 11388
Tssr11389 1 39558362 to 39558380 18 - TSS region transcription start site region 11389
Tssr11390 1 39558931 to 39558943 12 - TSS region transcription start site region 11390
Tssr11391 1 39558961 to 39558973 12 - TSS region transcription start site region 11391
Tssr11392 1 39564043 to 39564051 8 - TSS region transcription start site region 11392
Tssr11393 1 39567014 to 39567048 34 - TSS region transcription start site region 11393
Tssr11394 1 39567617 to 39567623 6 - TSS region transcription start site region 11394
Tssr11395 1 39570924 to 39570974 50 - TSS region transcription start site region 11395
Tssr11396 1 39571000 to 39571027 27 - TSS region transcription start site region 11396
Tssr11397 1 39571157 to 39571164 7 - TSS region transcription start site region 11397
Gm23722 1 39573746 to 39573875 129 - snoRNA gene predicted gene, 23722
Cpgi188 1 39576396 to 39577839 1443 CpG island CpG island 188
Tssr11398 1 39577288 to 39577312 24 - TSS region transcription start site region 11398
Tssr11399 1 39577317 to 39577331 14 - TSS region transcription start site region 11399
Tssr11400 1 39577340 to 39577427 87 - TSS region transcription start site region 11400
Tssr6391 1 39578891 to 39578909 18 + TSS region transcription start site region 6391
Tssr11401 1 39580893 to 39580904 11 - TSS region transcription start site region 11401
Gm5100 1 39597417 to 39598005 588 - pseudogene predicted gene 5100