Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:38988990-39214692

14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pdcl3	1	38987814 to 38997236	9422	+	protein coding gene	phosducin-like 3
Gm37309	1	38992678 to 38994316	1638	+	unclassified gene	predicted gene, 37309
Gm35222	1	39026007 to 39027357	1350	-	lncRNA gene	predicted gene, 35222
Gm37821	1	39048648 to 39057637	8989	-	lincRNA gene	predicted gene, 37821
Gm37091	1	39081252 to 39083338	2086	-	unclassified gene	predicted gene, 37091
Del(1)2Lt	1	39088990 to 39114692	25702		cytogenetic marker	deletion, Chr 1, Edward H Leiter 2
Tssr6370	1	39090093 to 39090098	5	+	TSS region	transcription start site region 6370
Lrnx11	1	39093727 to 74477206	35383479		QTL	learning-contextual 11
D1Mit123	1	39093727 to 39093858	131		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 123
Mir6349	1	39186896 to 39186992	96	-	miRNA gene	microRNA 6349
Cpgi183	1	39192459 to 39194696	2237		CpG island	CpG island 183
Npas2	1	39193731 to 39363236	169505	+	protein coding gene	neuronal PAS domain protein 2
Tssr6371	1	39193739 to 39193798	59	+	TSS region	transcription start site region 6371
Sle17	1	126517573 to 39093727	-87423846		QTL	systematic lupus erythematosus susceptibility 17