Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:38887814-39097236

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Chst10	1	38863867 to 38898161	34294	-	protein coding gene	carbohydrate sulfotransferase 10
Gm37707	1	38884754 to 38888072	3318	+	antisense lncRNA gene	predicted gene, 37707
Cpgi180	1	38897396 to 38898359	963		CpG island	CpG island 180
Tssr11359	1	38897924 to 38897961	37	-	TSS region	transcription start site region 11359
Tssr11360	1	38897980 to 38897992	12	-	TSS region	transcription start site region 11360
Tssr11361	1	38898037 to 38898058	21	-	TSS region	transcription start site region 11361
Tssr11362	1	38898066 to 38898077	11	-	TSS region	transcription start site region 11362
Tssr11363	1	38898084 to 38898177	93	-	TSS region	transcription start site region 11363
Tssr6365	1	38902866 to 38902891	25	+	TSS region	transcription start site region 6365
Tssr6366	1	38907926 to 38907930	4	+	TSS region	transcription start site region 6366
Gm6621	1	38907945 to 38908716	771	+	pseudogene	predicted gene 6621
Nms	1	38939149 to 38950276	11127	+	protein coding gene	neuromedin S
Cpgi181	1	38946045 to 38946240	195		CpG island	CpG island 181
Gm35171	1	38980806 to 38981810	1004	+	lncRNA gene	predicted gene, 35171
Cpgi182	1	38987424 to 38988076	652		CpG island	CpG island 182
Tssr6367	1	38987766 to 38987779	13	+	TSS region	transcription start site region 6367
Tssr6368	1	38987784 to 38987805	21	+	TSS region	transcription start site region 6368
Tssr6369	1	38987806 to 38987827	21	+	TSS region	transcription start site region 6369
Pdcl3	1	38987814 to 38997236	9422	+	protein coding gene	phosducin-like 3
Gm37309	1	38992678 to 38994316	1638	+	unclassified gene	predicted gene, 37309
Gm35222	1	39026007 to 39027357	1350	-	lncRNA gene	predicted gene, 35222
Gm37821	1	39048648 to 39057637	8989	-	lincRNA gene	predicted gene, 37821
Gm37091	1	39081252 to 39083338	2086	-	unclassified gene	predicted gene, 37091
Del(1)2Lt	1	39088990 to 39114692	25702		cytogenetic marker	deletion, Chr 1, Edward H Leiter 2
Tssr6370	1	39090093 to 39090098	5	+	TSS region	transcription start site region 6370
D1Mit123	1	39093727 to 39093858	131		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 123
Lrnx11	1	39093727 to 74477206	35383479		QTL	learning-contextual 11
Sle17	1	126517573 to 39093727	-87423846		QTL	systematic lupus erythematosus susceptibility 17