Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Eif5b | 1 | 57569 | + | protein coding gene | eukaryotic translation initiation factor 5B | |
Tssr6357 | 1 | 11 | + | TSS region | transcription start site region 6357 | |
Tssr6358 | 1 | 12 | + | TSS region | transcription start site region 6358 | |
Tssr6359 | 1 | 7 | + | TSS region | transcription start site region 6359 | |
Tssr6360 | 1 | 9 | + | TSS region | transcription start site region 6360 | |
Tssr6361 | 1 | 14 | + | TSS region | transcription start site region 6361 | |
Tssr6362 | 1 | 41 | + | TSS region | transcription start site region 6362 | |
Tssr6363 | 1 | 14 | + | TSS region | transcription start site region 6363 | |
Tssr6364 | 1 | 21 | + | TSS region | transcription start site region 6364 | |
Rev1 | 1 | 77015 | - | protein coding gene | REV1, DNA directed polymerase | |
Tssr11328 | 1 | 4 | - | TSS region | transcription start site region 11328 | |
Gm37062 | 1 | 1010 | - | sense intronic lncRNA gene | predicted gene, 37062 | |
Tssr11329 | 1 | 1 | - | TSS region | transcription start site region 11329 | |
Tssr11330 | 1 | 4 | - | TSS region | transcription start site region 11330 | |
Tssr11331 | 1 | 4 | - | TSS region | transcription start site region 11331 | |
Cpgi173 | 1 | 1693 | CpG island | CpG island 173 | ||
Tssr11332 | 1 | 61 | - | TSS region | transcription start site region 11332 | |
Tssr11333 | 1 | 82 | - | TSS region | transcription start site region 11333 | |
Gm5099 | 1 | 15869 | + | lincRNA gene | predicted gene 5099 | |
Aff3 | 1 | 452940 | - | protein coding gene | AF4/FMR2 family, member 3 | |
Cpgi174 | 1 | 571 | CpG island | CpG island 174 | ||
Cpgi175 | 1 | 263 | CpG island | CpG island 175 | ||
Gm16150 | 1 | 11246 | + | antisense lncRNA gene | predicted gene 16150 | |
Cpgi176 | 1 | 238 | CpG island | CpG island 176 | ||
5330403D14Rik | 1 | 1338 | unclassified gene | RIKEN cDNA 5330403D14 gene | ||
6030495B02Rik | 1 | 2964 | unclassified gene | RIKEN cDNA 6030495B02 gene | ||
Gm16151 | 1 | 4028 | + | antisense lncRNA gene | predicted gene 16151 | |
Tssr11334 | 1 | 13 | - | TSS region | transcription start site region 11334 | |
Tssr11335 | 1 | 16 | - | TSS region | transcription start site region 11335 | |
2900002H24Rik | 1 | 253 | unclassified gene | RIKEN cDNA 2900002H24 gene | ||
Cpgi177 | 1 | 578 | CpG island | CpG island 177 | ||
Gm16152 | 1 | 9025 | + | antisense lncRNA gene | predicted gene 16152 | |
Tssr53 | 1 | 3 | - | TSS region | transcription start site region 53 | |
Tssr11336 | 1 | 3 | - | TSS region | transcription start site region 11336 | |
Gm34727 | 1 | 528 | + | pseudogene | predicted gene, 34727 | |
Tssr11337 | 1 | 4 | - | TSS region | transcription start site region 11337 | |
D1Dcr26 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 26 | ||
D1Dcr27 | 1 | 96 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 27 | ||
D1Mit321 | 1 | 130 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 321 | ||
2310050P20Rik | 1 | 2092 | unclassified gene | RIKEN cDNA 2310050P20 gene | ||
Tssr11338 | 1 | 3 | - | TSS region | transcription start site region 11338 | |
Tssr11339 | 1 | 4 | - | TSS region | transcription start site region 11339 | |
Cpgi178 | 1 | 1856 | CpG island | CpG island 178 | ||
Tssr11340 | 1 | 52 | - | TSS region | transcription start site region 11340 | |
Tssr11341 | 1 | 11 | - | TSS region | transcription start site region 11341 | |
Tssr11342 | 1 | 13 | - | TSS region | transcription start site region 11342 | |
Tssr11343 | 1 | 19 | - | TSS region | transcription start site region 11343 | |
Tssr11344 | 1 | 15 | - | TSS region | transcription start site region 11344 | |
Gm34596 | 1 | 22701 | + | lncRNA gene | predicted gene, 34596 | |
Tssr11345 | 1 | 2 | - | TSS region | transcription start site region 11345 | |
Tssr11346 | 1 | 11 | - | TSS region | transcription start site region 11346 | |
Tssr11347 | 1 | 11 | - | TSS region | transcription start site region 11347 | |
Tssr11348 | 1 | 53 | - | TSS region | transcription start site region 11348 | |
Tssr11349 | 1 | 7 | - | TSS region | transcription start site region 11349 | |
Tssr11350 | 1 | 11 | - | TSS region | transcription start site region 11350 | |
Tssr11351 | 1 | 7 | - | TSS region | transcription start site region 11351 | |
D1Dcr28 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 28 | ||
D1Dcr29 | 1 | 101 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 29 | ||
Tssr54 | 1 | 7 | + | TSS region | transcription start site region 54 | |
Gm38135 | 1 | 501 | + | pseudogene | predicted gene, 38135 | |
D1Dcr30 | 1 | 96 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 30 | ||
Tssr55 | 1 | 4 | + | TSS region | transcription start site region 55 | |
2610300A13Rik | 1 | 502 | + | unclassified gene | RIKEN cDNA 2610300A13 gene | |
Tssr11352 | 1 | 7 | - | TSS region | transcription start site region 11352 | |
Lonrf2 | 1 | 43063 | - | protein coding gene | LON peptidase N-terminal domain and ring finger 2 | |
Tssr11353 | 1 | 3 | - | TSS region | transcription start site region 11353 | |
Tssr11354 | 1 | 5 | - | TSS region | transcription start site region 11354 | |
Tssr11355 | 1 | 12 | - | TSS region | transcription start site region 11355 | |
Cpgi179 | 1 | 1584 | CpG island | CpG island 179 | ||
Tssr11356 | 1 | 95 | - | TSS region | transcription start site region 11356 | |
Tssr11357 | 1 | 16 | - | TSS region | transcription start site region 11357 | |
Tssr11358 | 1 | 22 | - | TSS region | transcription start site region 11358 | |
Chst10 | 1 | 34294 | - | protein coding gene | carbohydrate sulfotransferase 10 | |
Gm37707 | 1 | 3318 | + | antisense lncRNA gene | predicted gene, 37707 | |
Cpgi180 | 1 | 963 | CpG island | CpG island 180 | ||
Tssr11359 | 1 | 37 | - | TSS region | transcription start site region 11359 | |
Tssr11360 | 1 | 12 | - | TSS region | transcription start site region 11360 | |
Tssr11361 | 1 | 21 | - | TSS region | transcription start site region 11361 | |
Tssr11362 | 1 | 11 | - | TSS region | transcription start site region 11362 | |
Tssr11363 | 1 | 93 | - | TSS region | transcription start site region 11363 | |
Tssr6365 | 1 | 25 | + | TSS region | transcription start site region 6365 | |
Tssr6366 | 1 | 4 | + | TSS region | transcription start site region 6366 | |
Gm6621 | 1 | 771 | + | pseudogene | predicted gene 6621 | |
Nms | 1 | 11127 | + | protein coding gene | neuromedin S | |
Cpgi181 | 1 | 195 | CpG island | CpG island 181 | ||
Gm35171 | 1 | 1004 | + | lncRNA gene | predicted gene, 35171 | |
Cpgi182 | 1 | 652 | CpG island | CpG island 182 | ||
Tssr6367 | 1 | 13 | + | TSS region | transcription start site region 6367 | |
Tssr6368 | 1 | 21 | + | TSS region | transcription start site region 6368 | |
Tssr6369 | 1 | 21 | + | TSS region | transcription start site region 6369 | |
Pdcl3 | 1 | 9422 | + | protein coding gene | phosducin-like 3 | |
Gm37309 | 1 | 1638 | + | unclassified gene | predicted gene, 37309 | |
Gm35222 | 1 | 1350 | - | lncRNA gene | predicted gene, 35222 | |
Gm37821 | 1 | 8989 | - | lincRNA gene | predicted gene, 37821 | |
Gm37091 | 1 | 2086 | - | unclassified gene | predicted gene, 37091 | |
Del(1)2Lt | 1 | 25702 | cytogenetic marker | deletion, Chr 1, Edward H Leiter 2 | ||
Tssr6370 | 1 | 5 | + | TSS region | transcription start site region 6370 | |
Lrnx11 | 1 | 35383479 | QTL | learning-contextual 11 | ||
D1Mit123 | 1 | 131 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 123 | ||
Mir6349 | 1 | 96 | - | miRNA gene | microRNA 6349 | |
Cpgi183 | 1 | 2237 | CpG island | CpG island 183 | ||
Npas2 | 1 | 169505 | + | protein coding gene | neuronal PAS domain protein 2 | |
Tssr6371 | 1 | 59 | + | TSS region | transcription start site region 6371 | |
Tssr56 | 1 | 2 | + | TSS region | transcription start site region 56 | |
Tssr6372 | 1 | 4 | + | TSS region | transcription start site region 6372 | |
Gm20428 | 1 | 282 | - | pseudogene | predicted gene 20428 | |
Gm17904 | 1 | 2451 | - | pseudogene | predicted gene, 17904 | |
Gm3617 | 1 | 554 | + | pseudogene | predicted gene 3617 | |
Tssr6373 | 1 | 1 | + | TSS region | transcription start site region 6373 | |
Cpgi184 | 1 | 170 | CpG island | CpG island 184 | ||
Tssr6374 | 1 | 5 | + | TSS region | transcription start site region 6374 | |
Cpgi185 | 1 | 1483 | CpG island | CpG island 185 | ||
Tssr6375 | 1 | 32 | + | TSS region | transcription start site region 6375 | |
Rpl31 | 1 | 4060 | + | protein coding gene | ribosomal protein L31 | |
Tssr6376 | 1 | 11 | + | TSS region | transcription start site region 6376 | |
Tssr6377 | 1 | 31 | + | TSS region | transcription start site region 6377 | |
Tssr6378 | 1 | 26 | + | TSS region | transcription start site region 6378 | |
Tssr6379 | 1 | 14 | + | TSS region | transcription start site region 6379 | |
Tbc1d8 | 1 | 107263 | - | protein coding gene | TBC1 domain family, member 8 | |
D1Dcr31 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 31 | ||
Gm37265 | 1 | 884 | - | unclassified gene | predicted gene, 37265 | |
Tssr11364 | 1 | 16 | - | TSS region | transcription start site region 11364 | |
Tssr6380 | 1 | 23 | + | TSS region | transcription start site region 6380 | |
Tssr11365 | 1 | 11 | - | TSS region | transcription start site region 11365 | |
Tssr11366 | 1 | 6 | - | TSS region | transcription start site region 11366 | |
Tssr57 | 1 | 19 | - | TSS region | transcription start site region 57 | |
Cpgi186 | 1 | 1244 | CpG island | CpG island 186 | ||
Tssr11367 | 1 | 53 | - | TSS region | transcription start site region 11367 | |
Tssr11368 | 1 | 26 | - | TSS region | transcription start site region 11368 | |
Tssr6381 | 1 | 19 | + | TSS region | transcription start site region 6381 | |
Tssr58 | 1 | 2 | - | TSS region | transcription start site region 58 | |
Tssr6382 | 1 | 11 | + | TSS region | transcription start site region 6382 | |
Gm24826 | 1 | 214 | + | snoRNA gene | predicted gene, 24826 | |
Cpgi187 | 1 | 1132 | CpG island | CpG island 187 | ||
Tssr6383 | 1 | 92 | + | TSS region | transcription start site region 6383 | |
Cnot11 | 1 | 11079 | + | protein coding gene | CCR4-NOT transcription complex, subunit 11 | |
Gm15832 | 1 | 4432 | - | unclassified non-coding RNA gene | predicted gene 15832 | |
Snord89 | 1 | 93 | - | snoRNA gene | small nucleolar RNA, C/D box 89 | |
Tssr11369 | 1 | 4 | - | TSS region | transcription start site region 11369 | |
Gm18446 | 1 | 576 | + | pseudogene | predicted gene, 18446 | |
Rnf149 | 1 | 26109 | - | protein coding gene | ring finger protein 149 | |
Tssr6384 | 1 | 6 | + | TSS region | transcription start site region 6384 | |
Tssr6385 | 1 | 17 | + | TSS region | transcription start site region 6385 | |
Tssr6386 | 1 | 9 | + | TSS region | transcription start site region 6386 | |
Tssr6387 | 1 | 19 | + | TSS region | transcription start site region 6387 | |
Tssr6388 | 1 | 26 | + | TSS region | transcription start site region 6388 | |
Tssr11370 | 1 | 11 | - | TSS region | transcription start site region 11370 | |
Tssr11371 | 1 | 9 | - | TSS region | transcription start site region 11371 | |
Tssr6389 | 1 | 29 | + | TSS region | transcription start site region 6389 | |
Tssr11372 | 1 | 5 | - | TSS region | transcription start site region 11372 | |
Tssr11373 | 1 | 11 | - | TSS region | transcription start site region 11373 | |
Tssr11374 | 1 | 18 | - | TSS region | transcription start site region 11374 | |
Tssr11375 | 1 | 23 | - | TSS region | transcription start site region 11375 | |
Tssr11376 | 1 | 28 | - | TSS region | transcription start site region 11376 | |
Tssr11377 | 1 | 13 | - | TSS region | transcription start site region 11377 | |
Tssr11378 | 1 | 11 | - | TSS region | transcription start site region 11378 | |
Tssr11379 | 1 | 29 | - | TSS region | transcription start site region 11379 | |
Tssr11380 | 1 | 11 | - | TSS region | transcription start site region 11380 | |
Tssr11381 | 1 | 5 | - | TSS region | transcription start site region 11381 | |
Tssr11382 | 1 | 9 | - | TSS region | transcription start site region 11382 | |
Tssr11383 | 1 | 43 | - | TSS region | transcription start site region 11383 | |
Tssr6390 | 1 | 13 | + | TSS region | transcription start site region 6390 | |
Tssr11384 | 1 | 20 | - | TSS region | transcription start site region 11384 | |
Tssr11385 | 1 | 33 | - | TSS region | transcription start site region 11385 | |
Tssr11386 | 1 | 25 | - | TSS region | transcription start site region 11386 | |
Tssr11387 | 1 | 10 | - | TSS region | transcription start site region 11387 | |
Tssr11388 | 1 | 24 | - | TSS region | transcription start site region 11388 | |
Tssr11389 | 1 | 18 | - | TSS region | transcription start site region 11389 | |
Tssr11390 | 1 | 12 | - | TSS region | transcription start site region 11390 | |
Tssr11391 | 1 | 12 | - | TSS region | transcription start site region 11391 | |
Tssr11392 | 1 | 8 | - | TSS region | transcription start site region 11392 | |
Tssr11393 | 1 | 34 | - | TSS region | transcription start site region 11393 | |
Tssr11394 | 1 | 6 | - | TSS region | transcription start site region 11394 | |
Tssr11395 | 1 | 50 | - | TSS region | transcription start site region 11395 | |
Tssr11396 | 1 | 27 | - | TSS region | transcription start site region 11396 | |
Tssr11397 | 1 | 7 | - | TSS region | transcription start site region 11397 | |
Gm23722 | 1 | 129 | - | snoRNA gene | predicted gene, 23722 | |
Cpgi188 | 1 | 1443 | CpG island | CpG island 188 | ||
Tssr11398 | 1 | 24 | - | TSS region | transcription start site region 11398 | |
Tssr11399 | 1 | 14 | - | TSS region | transcription start site region 11399 | |
Tssr11400 | 1 | 87 | - | TSS region | transcription start site region 11400 | |
Tssr6391 | 1 | 18 | + | TSS region | transcription start site region 6391 | |
Tssr11401 | 1 | 11 | - | TSS region | transcription start site region 11401 | |
Gm5100 | 1 | 588 | - | pseudogene | predicted gene 5100 | |
Tssr59 | 1 | 25 | - | TSS region | transcription start site region 59 | |
Tssr60 | 1 | 7 | + | TSS region | transcription start site region 60 | |
Tssr11402 | 1 | 3 | - | TSS region | transcription start site region 11402 | |
Creg2 | 1 | 32776 | - | protein coding gene | cellular repressor of E1A-stimulated genes 2 | |
Tssr11403 | 1 | 12 | - | TSS region | transcription start site region 11403 | |
Tssr11404 | 1 | 6 | - | TSS region | transcription start site region 11404 | |
Cpgi189 | 1 | 1282 | CpG island | CpG island 189 | ||
D930019O06Rik | 1 | 7214 | + | antisense lncRNA gene | RIKEN cDNA D930019O06 | |
Tssr6392 | 1 | 9 | + | TSS region | transcription start site region 6392 | |
Tssr6393 | 1 | 11 | + | TSS region | transcription start site region 6393 | |
Tssr11405 | 1 | 33 | - | TSS region | transcription start site region 11405 | |
Tssr11406 | 1 | 51 | - | TSS region | transcription start site region 11406 | |
Tssr11407 | 1 | 31 | - | TSS region | transcription start site region 11407 | |
Tssr11408 | 1 | 39 | - | TSS region | transcription start site region 11408 | |
Rfx8 | 1 | 55690 | - | protein coding gene | regulatory factor X 8 | |
D1Ertd259e | 1 | 249 | DNA segment | DNA segment, Chr 1, ERATO Doi 259, expressed |