Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:37747208-37997233

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tsga10 1 37754776 to 37866429 111653 - protein coding gene testis specific 10
Tssr11315 1 37755423 to 37755426 3 - TSS region transcription start site region 11315
Cpgi167 1 37864480 to 37865628 1148 CpG island CpG island 167
Tssr11316 1 37864801 to 37864813 12 - TSS region transcription start site region 11316
Tssr11317 1 37865040 to 37865116 76 - TSS region transcription start site region 11317
Tssr11318 1 37865128 to 37865139 11 - TSS region transcription start site region 11318
Gm26805 1 37865299 to 37871388 6089 + antisense lncRNA gene predicted gene, 26805
Lipt1 1 37871738 to 37876228 4490 + protein coding gene lipoyltransferase 1
Tssr6323 1 37872208 to 37872233 25 + TSS region transcription start site region 6323
Cpgi168 1 37872271 to 37872621 350 CpG island CpG island 168
Tssr6324 1 37872333 to 37872371 38 + TSS region transcription start site region 6324
Cpgi169 1 37875259 to 37875842 583 CpG island CpG island 169
Mitd1 1 37878888 to 37890442 11554 - protein coding gene MIT, microtubule interacting and transport, domain containing 1
Tssr6325 1 37886360 to 37886364 4 + TSS region transcription start site region 6325
Cpgi170 1 37890086 to 37890787 701 CpG island CpG island 170
Tssr11319 1 37890310 to 37890324 14 - TSS region transcription start site region 11319
Tssr11320 1 37890333 to 37890416 83 - TSS region transcription start site region 11320
Mrpl30 1 37890471 to 37898338 7867 + protein coding gene mitochondrial ribosomal protein L30
Tssr6326 1 37890519 to 37890542 23 + TSS region transcription start site region 6326
Tssr6327 1 37897850 to 37897853 3 + TSS region transcription start site region 6327
Lyg2 1 37905923 to 37916493 10570 - protein coding gene lysozyme G-like 2
Tssr11321 1 37916412 to 37916426 14 - TSS region transcription start site region 11321
Tssr11322 1 37916485 to 37916499 14 - TSS region transcription start site region 11322
Gm15457 1 37933596 to 37954136 20540 + antisense lncRNA gene predicted gene 15457
Lyg1 1 37946738 to 37957759 11021 - protein coding gene lysozyme G-like 1
Tssr11323 1 37957757 to 37957760 3 - TSS region transcription start site region 11323
D1Mit518 1 37966284 to 37966435 151 DNA segment DNA Segment, Chr 1, Massachusetts Institute of Technology-518
Gm23409 1 37973967 to 37974203 236 + unclassified non-coding RNA gene predicted gene, 23409
Txndc9 1 37985189 to 37997893 12704 - protein coding gene thioredoxin domain containing 9
Cpgi171 1 37996845 to 37997498 653 CpG island CpG island 171
Tssr11324 1 37996919 to 37996950 31 - TSS region transcription start site region 11324
Tssr11325 1 37996961 to 37996976 15 - TSS region transcription start site region 11325
Tssr11326 1 37997219 to 37997280 61 - TSS region transcription start site region 11326