Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
2010300C02Rik | 1 | 108408 | - | protein coding gene | RIKEN cDNA 2010300C02 gene | |
Gm39628 | 1 | 11793 | + | lncRNA gene | predicted gene, 39628 | |
Gm19863 | 1 | 2217 | - | unclassified gene | predicted gene, 19863 | |
Tssr11313 | 1 | 9 | - | TSS region | transcription start site region 11313 | |
Cpgi166 | 1 | 1180 | CpG island | CpG island 166 | ||
Tssr11314 | 1 | 117 | - | TSS region | transcription start site region 11314 | |
Tsga10 | 1 | 111653 | - | protein coding gene | testis specific 10 | |
Tssr11315 | 1 | 3 | - | TSS region | transcription start site region 11315 | |
Cpgi167 | 1 | 1148 | CpG island | CpG island 167 | ||
Tssr11316 | 1 | 12 | - | TSS region | transcription start site region 11316 | |
Tssr11317 | 1 | 76 | - | TSS region | transcription start site region 11317 | |
Tssr11318 | 1 | 11 | - | TSS region | transcription start site region 11318 | |
Gm26805 | 1 | 6089 | + | antisense lncRNA gene | predicted gene, 26805 | |
Lipt1 | 1 | 4490 | + | protein coding gene | lipoyltransferase 1 | |
Tssr6323 | 1 | 25 | + | TSS region | transcription start site region 6323 | |
Cpgi168 | 1 | 350 | CpG island | CpG island 168 | ||
Tssr6324 | 1 | 38 | + | TSS region | transcription start site region 6324 | |
Cpgi169 | 1 | 583 | CpG island | CpG island 169 | ||
Mitd1 | 1 | 11554 | - | protein coding gene | MIT, microtubule interacting and transport, domain containing 1 | |
Tssr6325 | 1 | 4 | + | TSS region | transcription start site region 6325 | |
Cpgi170 | 1 | 701 | CpG island | CpG island 170 | ||
Tssr11319 | 1 | 14 | - | TSS region | transcription start site region 11319 | |
Tssr11320 | 1 | 83 | - | TSS region | transcription start site region 11320 | |
Mrpl30 | 1 | 7867 | + | protein coding gene | mitochondrial ribosomal protein L30 | |
Tssr6326 | 1 | 23 | + | TSS region | transcription start site region 6326 | |
Tssr6327 | 1 | 3 | + | TSS region | transcription start site region 6327 | |
Lyg2 | 1 | 10570 | - | protein coding gene | lysozyme G-like 2 | |
Tssr11321 | 1 | 14 | - | TSS region | transcription start site region 11321 | |
Tssr11322 | 1 | 14 | - | TSS region | transcription start site region 11322 | |
Gm15457 | 1 | 20540 | + | antisense lncRNA gene | predicted gene 15457 | |
Lyg1 | 1 | 11021 | - | protein coding gene | lysozyme G-like 1 | |
Tssr11323 | 1 | 3 | - | TSS region | transcription start site region 11323 | |
D1Mit518 | 1 | 151 | DNA segment | DNA Segment, Chr 1, Massachusetts Institute of Technology-518 | ||
Gm23409 | 1 | 236 | + | unclassified non-coding RNA gene | predicted gene, 23409 | |
Txndc9 | 1 | 12704 | - | protein coding gene | thioredoxin domain containing 9 | |
Cpgi171 | 1 | 653 | CpG island | CpG island 171 | ||
Tssr11324 | 1 | 31 | - | TSS region | transcription start site region 11324 | |
Tssr11325 | 1 | 15 | - | TSS region | transcription start site region 11325 | |
Tssr11326 | 1 | 61 | - | TSS region | transcription start site region 11326 | |
Cpgi172 | 1 | 918 | CpG island | CpG island 172 | ||
Tssr6328 | 1 | 7 | + | TSS region | transcription start site region 6328 | |
Tssr6329 | 1 | 11 | + | TSS region | transcription start site region 6329 | |
Tssr49 | 1 | 7 | + | TSS region | transcription start site region 49 | |
Tssr6330 | 1 | 9 | + | TSS region | transcription start site region 6330 | |
Eif5b | 1 | 57569 | + | protein coding gene | eukaryotic translation initiation factor 5B | |
Tssr6331 | 1 | 17 | + | TSS region | transcription start site region 6331 | |
Tssr6332 | 1 | 34 | + | TSS region | transcription start site region 6332 | |
Tssr6333 | 1 | 13 | + | TSS region | transcription start site region 6333 | |
Tssr50 | 1 | 12 | + | TSS region | transcription start site region 50 | |
Tssr51 | 1 | 18 | + | TSS region | transcription start site region 51 | |
Tssr52 | 1 | 3 | + | TSS region | transcription start site region 52 | |
Tssr6334 | 1 | 3 | + | TSS region | transcription start site region 6334 | |
B230213L16Rik | 1 | 3071 | protein coding gene | RIKEN cDNA B230213L16 gene | ||
Tssr6335 | 1 | 14 | + | TSS region | transcription start site region 6335 | |
Tssr6336 | 1 | 12 | + | TSS region | transcription start site region 6336 | |
Tssr6337 | 1 | 14 | + | TSS region | transcription start site region 6337 | |
Tssr6338 | 1 | 17 | + | TSS region | transcription start site region 6338 | |
Tssr6339 | 1 | 44 | + | TSS region | transcription start site region 6339 | |
Tssr6340 | 1 | 22 | + | TSS region | transcription start site region 6340 | |
Tssr6341 | 1 | 13 | + | TSS region | transcription start site region 6341 | |
Tssr6342 | 1 | 11 | + | TSS region | transcription start site region 6342 | |
Tssr6343 | 1 | 12 | + | TSS region | transcription start site region 6343 | |
Tssr6344 | 1 | 14 | + | TSS region | transcription start site region 6344 | |
Tssr6345 | 1 | 24 | + | TSS region | transcription start site region 6345 | |
Tssr6346 | 1 | 12 | + | TSS region | transcription start site region 6346 | |
Tssr6347 | 1 | 19 | + | TSS region | transcription start site region 6347 | |
Tssr6348 | 1 | 11 | + | TSS region | transcription start site region 6348 | |
Tssr6349 | 1 | 34 | + | TSS region | transcription start site region 6349 | |
Tssr6350 | 1 | 19 | + | TSS region | transcription start site region 6350 | |
Tssr6351 | 1 | 18 | + | TSS region | transcription start site region 6351 | |
Tssr6352 | 1 | 13 | + | TSS region | transcription start site region 6352 | |
Tssr6353 | 1 | 35 | + | TSS region | transcription start site region 6353 | |
Tssr11327 | 1 | 18 | - | TSS region | transcription start site region 11327 | |
Tssr6354 | 1 | 20 | + | TSS region | transcription start site region 6354 | |
Tssr6355 | 1 | 20 | + | TSS region | transcription start site region 6355 | |
Gm34448 | 1 | 6970 | - | lncRNA gene | predicted gene, 34448 | |
Tssr6356 | 1 | 19 | + | TSS region | transcription start site region 6356 | |
Tssr6357 | 1 | 11 | + | TSS region | transcription start site region 6357 | |
Tssr6358 | 1 | 12 | + | TSS region | transcription start site region 6358 | |
Tssr6359 | 1 | 7 | + | TSS region | transcription start site region 6359 | |
Tssr6360 | 1 | 9 | + | TSS region | transcription start site region 6360 | |
Tssr6361 | 1 | 14 | + | TSS region | transcription start site region 6361 | |
Tssr6362 | 1 | 41 | + | TSS region | transcription start site region 6362 | |
Tssr6363 | 1 | 14 | + | TSS region | transcription start site region 6363 | |
Tssr6364 | 1 | 21 | + | TSS region | transcription start site region 6364 | |
Rev1 | 1 | 77015 | - | protein coding gene | REV1, DNA directed polymerase | |
Tssr11328 | 1 | 4 | - | TSS region | transcription start site region 11328 | |
Gm37062 | 1 | 1010 | - | sense intronic lncRNA gene | predicted gene, 37062 | |
Tssr11329 | 1 | 1 | - | TSS region | transcription start site region 11329 | |
Tssr11330 | 1 | 4 | - | TSS region | transcription start site region 11330 | |
Tssr11331 | 1 | 4 | - | TSS region | transcription start site region 11331 | |
Cpgi173 | 1 | 1693 | CpG island | CpG island 173 | ||
Tssr11332 | 1 | 61 | - | TSS region | transcription start site region 11332 | |
Tssr11333 | 1 | 82 | - | TSS region | transcription start site region 11333 | |
Gm5099 | 1 | 15869 | + | lincRNA gene | predicted gene 5099 | |
Aff3 | 1 | 452940 | - | protein coding gene | AF4/FMR2 family, member 3 | |
Cpgi174 | 1 | 571 | CpG island | CpG island 174 | ||
Cpgi175 | 1 | 263 | CpG island | CpG island 175 | ||
Gm16150 | 1 | 11246 | + | antisense lncRNA gene | predicted gene 16150 | |
Cpgi176 | 1 | 238 | CpG island | CpG island 176 | ||
5330403D14Rik | 1 | 1338 | unclassified gene | RIKEN cDNA 5330403D14 gene | ||
6030495B02Rik | 1 | 2964 | unclassified gene | RIKEN cDNA 6030495B02 gene | ||
Gm16151 | 1 | 4028 | + | antisense lncRNA gene | predicted gene 16151 | |
Tssr11334 | 1 | 13 | - | TSS region | transcription start site region 11334 | |
Tssr11335 | 1 | 16 | - | TSS region | transcription start site region 11335 | |
2900002H24Rik | 1 | 253 | unclassified gene | RIKEN cDNA 2900002H24 gene | ||
Cpgi177 | 1 | 578 | CpG island | CpG island 177 | ||
Gm16152 | 1 | 9025 | + | antisense lncRNA gene | predicted gene 16152 | |
Tssr53 | 1 | 3 | - | TSS region | transcription start site region 53 | |
Tssr11336 | 1 | 3 | - | TSS region | transcription start site region 11336 | |
Gm34727 | 1 | 528 | + | pseudogene | predicted gene, 34727 | |
Tssr11337 | 1 | 4 | - | TSS region | transcription start site region 11337 | |
D1Dcr26 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 26 | ||
D1Dcr27 | 1 | 96 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 27 | ||
D1Mit321 | 1 | 130 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 321 | ||
2310050P20Rik | 1 | 2092 | unclassified gene | RIKEN cDNA 2310050P20 gene | ||
Tssr11338 | 1 | 3 | - | TSS region | transcription start site region 11338 | |
Tssr11339 | 1 | 4 | - | TSS region | transcription start site region 11339 | |
Cpgi178 | 1 | 1856 | CpG island | CpG island 178 | ||
Tssr11340 | 1 | 52 | - | TSS region | transcription start site region 11340 | |
Tssr11341 | 1 | 11 | - | TSS region | transcription start site region 11341 | |
Tssr11342 | 1 | 13 | - | TSS region | transcription start site region 11342 | |
Tssr11343 | 1 | 19 | - | TSS region | transcription start site region 11343 | |
Tssr11344 | 1 | 15 | - | TSS region | transcription start site region 11344 | |
Gm34596 | 1 | 22701 | + | lncRNA gene | predicted gene, 34596 | |
Tssr11345 | 1 | 2 | - | TSS region | transcription start site region 11345 | |
Tssr11346 | 1 | 11 | - | TSS region | transcription start site region 11346 | |
Tssr11347 | 1 | 11 | - | TSS region | transcription start site region 11347 | |
Tssr11348 | 1 | 53 | - | TSS region | transcription start site region 11348 | |
Tssr11349 | 1 | 7 | - | TSS region | transcription start site region 11349 | |
Tssr11350 | 1 | 11 | - | TSS region | transcription start site region 11350 | |
Tssr11351 | 1 | 7 | - | TSS region | transcription start site region 11351 | |
D1Dcr28 | 1 | 95 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 28 | ||
D1Dcr29 | 1 | 101 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 29 | ||
Tssr54 | 1 | 7 | + | TSS region | transcription start site region 54 | |
Gm38135 | 1 | 501 | + | pseudogene | predicted gene, 38135 | |
D1Dcr30 | 1 | 96 | DNA segment | DNA Segment, Chr 1, Derry C. Roopenian 30 | ||
Tssr55 | 1 | 4 | + | TSS region | transcription start site region 55 | |
2610300A13Rik | 1 | 502 | + | unclassified gene | RIKEN cDNA 2610300A13 gene | |
Tssr11352 | 1 | 7 | - | TSS region | transcription start site region 11352 | |
Lonrf2 | 1 | 43063 | - | protein coding gene | LON peptidase N-terminal domain and ring finger 2 | |
Tssr11353 | 1 | 3 | - | TSS region | transcription start site region 11353 | |
Tssr11354 | 1 | 5 | - | TSS region | transcription start site region 11354 | |
Tssr11355 | 1 | 12 | - | TSS region | transcription start site region 11355 | |
Cpgi179 | 1 | 1584 | CpG island | CpG island 179 | ||
Tssr11356 | 1 | 95 | - | TSS region | transcription start site region 11356 | |
Tssr11357 | 1 | 16 | - | TSS region | transcription start site region 11357 | |
Tssr11358 | 1 | 22 | - | TSS region | transcription start site region 11358 | |
Chst10 | 1 | 34294 | - | protein coding gene | carbohydrate sulfotransferase 10 | |
Gm37707 | 1 | 3318 | + | antisense lncRNA gene | predicted gene, 37707 | |
Cpgi180 | 1 | 963 | CpG island | CpG island 180 | ||
Tssr11359 | 1 | 37 | - | TSS region | transcription start site region 11359 | |
Tssr11360 | 1 | 12 | - | TSS region | transcription start site region 11360 | |
Tssr11361 | 1 | 21 | - | TSS region | transcription start site region 11361 | |
Tssr11362 | 1 | 11 | - | TSS region | transcription start site region 11362 | |
Tssr11363 | 1 | 93 | - | TSS region | transcription start site region 11363 | |
Tssr6365 | 1 | 25 | + | TSS region | transcription start site region 6365 | |
Tssr6366 | 1 | 4 | + | TSS region | transcription start site region 6366 | |
Gm6621 | 1 | 771 | + | pseudogene | predicted gene 6621 | |
Nms | 1 | 11127 | + | protein coding gene | neuromedin S | |
Cpgi181 | 1 | 195 | CpG island | CpG island 181 | ||
Gm35171 | 1 | 1004 | + | lncRNA gene | predicted gene, 35171 | |
Cpgi182 | 1 | 652 | CpG island | CpG island 182 | ||
Tssr6367 | 1 | 13 | + | TSS region | transcription start site region 6367 | |
Tssr6368 | 1 | 21 | + | TSS region | transcription start site region 6368 | |
Tssr6369 | 1 | 21 | + | TSS region | transcription start site region 6369 | |
Pdcl3 | 1 | 9422 | + | protein coding gene | phosducin-like 3 | |
Gm37309 | 1 | 1638 | + | unclassified gene | predicted gene, 37309 | |
Gm35222 | 1 | 1350 | - | lncRNA gene | predicted gene, 35222 | |
Gm37821 | 1 | 8989 | - | lincRNA gene | predicted gene, 37821 | |
Gm37091 | 1 | 2086 | - | unclassified gene | predicted gene, 37091 | |
Del(1)2Lt | 1 | 25702 | cytogenetic marker | deletion, Chr 1, Edward H Leiter 2 | ||
Tssr6370 | 1 | 5 | + | TSS region | transcription start site region 6370 | |
Lrnx11 | 1 | 35383479 | QTL | learning-contextual 11 | ||
D1Mit123 | 1 | 131 | DNA segment | DNA segment, Chr 1, Massachusetts Institute of Technology 123 | ||
Mir6349 | 1 | 96 | - | miRNA gene | microRNA 6349 | |
Cpgi183 | 1 | 2237 | CpG island | CpG island 183 | ||
Npas2 | 1 | 169505 | + | protein coding gene | neuronal PAS domain protein 2 | |
Tssr6371 | 1 | 59 | + | TSS region | transcription start site region 6371 | |
Tssr56 | 1 | 2 | + | TSS region | transcription start site region 56 | |
Tssr6372 | 1 | 4 | + | TSS region | transcription start site region 6372 | |
Gm20428 | 1 | 282 | - | pseudogene | predicted gene 20428 | |
Gm17904 | 1 | 2451 | - | pseudogene | predicted gene, 17904 | |
Gm3617 | 1 | 554 | + | pseudogene | predicted gene 3617 | |
Sle17 | 1 | -87423846 | QTL | systematic lupus erythematosus susceptibility 17 |