Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:37534439-37694449

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mgat4a 1 37439340 to 37541016 101676 - protein coding gene mannoside acetylglucosaminyltransferase 4, isoenzyme A
Tssr11307 1 37536232 to 37536236 4 - TSS region transcription start site region 11307
Cpgi163 1 37540287 to 37541527 1240 CpG island CpG island 163
Tssr11308 1 37540980 to 37540992 12 - TSS region transcription start site region 11308
Tssr11309 1 37541003 to 37541046 43 - TSS region transcription start site region 11309
Tssr6315 1 37541209 to 37541212 3 + TSS region transcription start site region 6315
Tssr11310 1 37559799 to 37559812 13 - TSS region transcription start site region 11310
Tssr47 1 37580151 to 37580153 2 + TSS region transcription start site region 47
Tssr48 1 37584217 to 37584220 3 + TSS region transcription start site region 48
Tssr6316 1 37603593 to 37603595 2 + TSS region transcription start site region 6316
D1Dcr52 1 37603667 to 37603762 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 52
2010300C02Rik 1 37611677 to 37720085 108408 - protein coding gene RIKEN cDNA 2010300C02 gene
Cpgi164 1 37614230 to 37614441 211 CpG island CpG island 164
Tssr6317 1 37614409 to 37614420 11 + TSS region transcription start site region 6317
Tssr6318 1 37614439 to 37614449 10 + TSS region transcription start site region 6318
4930556I23Rik 1 37614507 to 37615373 866 + antisense lncRNA gene RIKEN cDNA 4930556I23 gene
D1Mit245 1 37621937 to 37622077 140 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 245
D1Dcr53 1 37642618 to 37642718 100 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 53
4930470B04Rik 1 37660722 to 37662647 1925 + lncRNA gene RIKEN cDNA 4930470B04 gene
Tssr6319 1 37660740 to 37660750 10 + TSS region transcription start site region 6319
Tssr6320 1 37660769 to 37660787 18 + TSS region transcription start site region 6320
Tssr6321 1 37660792 to 37660798 6 + TSS region transcription start site region 6321
Tssr11311 1 37665694 to 37665715 21 - TSS region transcription start site region 11311
Gm39628 1 37684600 to 37696393 11793 + lncRNA gene predicted gene, 39628
Cpgi165 1 37687115 to 37687538 423 CpG island CpG island 165
Tssr6322 1 37687337 to 37687350 13 + TSS region transcription start site region 6322
Tssr11312 1 37691523 to 37691526 3 - TSS region transcription start site region 11312
Gm19863 1 37694447 to 37696664 2217 - unclassified gene predicted gene, 19863