Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:36090028-36294302

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Hs6st1	1	36068400 to 36106446	38046	+	protein coding gene	heparan sulfate 6-O-sulfotransferase 1
Tssr11240	1	36098552 to 36098561	9	-	TSS region	transcription start site region 11240
Cpgi134	1	36103456 to 36104295	839		CpG island	CpG island 134
Tssr6246	1	36104859 to 36104873	14	+	TSS region	transcription start site region 6246
Gm37335	1	36105384 to 36106446	1062	-	antisense lncRNA gene	predicted gene, 37335
Tssr6247	1	36105702 to 36105732	30	+	TSS region	transcription start site region 6247
Gm33280	1	36129866 to 36134928	5062	+	lincRNA gene	predicted gene, 33280
Tssr6248	1	36132012 to 36132025	13	+	TSS region	transcription start site region 6248
Uggt1	1	36140028 to 36244302	104274	-	protein coding gene	UDP-glucose glycoprotein glucosyltransferase 1
Mir6897	1	36144252 to 36144313	61	-	miRNA gene	microRNA 6897
Gm18750	1	36177669 to 36179017	1348	-	pseudogene	predicted gene, 18750
Tssr11241	1	36241085 to 36241089	4	-	TSS region	transcription start site region 11241
Cpgi135	1	36243810 to 36244523	713		CpG island	CpG island 135
Tssr11242	1	36244122 to 36244131	9	-	TSS region	transcription start site region 11242
Tssr11243	1	36244132 to 36244176	44	-	TSS region	transcription start site region 11243
Tssr11244	1	36244245 to 36244320	75	-	TSS region	transcription start site region 11244
Tssr11245	1	36244324 to 36244335	11	-	TSS region	transcription start site region 11245
Gm39625	1	36244383 to 36250542	6159	+	lncRNA gene	predicted gene, 39625
Cpgi136	1	36254865 to 36255049	184		CpG island	CpG island 136
Tssr6249	1	36262417 to 36262427	10	+	TSS region	transcription start site region 6249
Neurl3	1	36264602 to 36274674	10072	-	protein coding gene	neuralized E3 ubiquitin protein ligase 3
Tssr6250	1	36265422 to 36265436	14	+	TSS region	transcription start site region 6250
Tssr11246	1	36267988 to 36268009	21	-	TSS region	transcription start site region 11246
Cpgi137	1	36268711 to 36269876	1165		CpG island	CpG island 137
Tssr11247	1	36269538 to 36269550	12	-	TSS region	transcription start site region 11247
Tssr6251	1	36272790 to 36272792	2	+	TSS region	transcription start site region 6251
Tssr11248	1	36273427 to 36273443	16	-	TSS region	transcription start site region 11248
Tssr11249	1	36274444 to 36274467	23	-	TSS region	transcription start site region 11249
Tssr11250	1	36274470 to 36274496	26	-	TSS region	transcription start site region 11250
Tssr6252	1	36274572 to 36274617	45	+	TSS region	transcription start site region 6252