Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:34665584-34835652

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38647 1 34657236 to 34667004 9768 - lncRNA gene predicted gene, 38647
Cpgi123 1 34677806 to 34678793 987 CpG island CpG island 123
Tssr6230 1 34678149 to 34678175 26 + TSS region transcription start site region 6230
Tssr6231 1 34678176 to 34678213 37 + TSS region transcription start site region 6231
Gm32920 1 34685665 to 34688842 3177 - lncRNA gene predicted gene, 32920
Tssr6232 1 34697545 to 34697551 6 + TSS region transcription start site region 6232
W6q14 1 34721057 to 73937756 39216699 QTL weight 6 weeks QTL 14
D1Mit72 1 34721057 to 34721205 148 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 72
Estoq4 1 34721057 to 73937756 39216699 QTL embryo survival total QTL 4
Lvrq3 1 34721057 to 73937756 39216699 QTL liver weight QTL 3
W10q6 1 34721057 to 73937756 39216699 QTL weight 10 weeks QTL 6
W3q12 1 34721057 to 73937756 39216699 QTL weight 3 weeks QTL 12
Lgq5 1 34721057 to 73937756 39216699 QTL late growth QTL 5
Cpgi124 1 34723746 to 34723985 239 CpG island CpG island 124
Gm46087 1 34748272 to 34757061 8789 - lncRNA gene predicted gene, 46087
Cpgi125 1 34750164 to 34751395 1231 CpG island CpG island 125
Tssr6233 1 34750584 to 34750652 68 + TSS region transcription start site region 6233
Gm37224 1 34752775 to 34752922 147 + pseudogene predicted gene, 37224
Gm37845 1 34753123 to 34753477 354 + pseudogene predicted gene, 37845
Gm32790 1 34759936 to 34792553 32617 - lncRNA gene predicted gene, 32790
Cpgi126 1 34801633 to 34802304 671 CpG island CpG island 126
Tssr6234 1 34801708 to 34801776 68 + TSS region transcription start site region 6234
Arhgef4 1 34801722 to 34812754 11032 + protein coding gene Rho guanine nucleotide exchange factor (GEF) 4
Cpgi127 1 34805957 to 34806507 550 CpG island CpG island 127
Gm38336 1 34809360 to 34811908 2548 - antisense lncRNA gene predicted gene, 38336
Fam168b 1 34813218 to 34843050 29832 - protein coding gene family with sequence similarity 168, member B
Tssr11226 1 34816896 to 34816929 33 - TSS region transcription start site region 11226
Tssr11227 1 34818072 to 34818099 27 - TSS region transcription start site region 11227
Tssr11228 1 34819755 to 34819769 14 - TSS region transcription start site region 11228
Tssr11229 1 34819927 to 34819964 37 - TSS region transcription start site region 11229
Gm37127 1 34823525 to 34826560 3035 + unclassified gene predicted gene, 37127
Splq3 1 150318120 to 34721057 -115597063 QTL spleen weight QTL 3
Kidq2 1 150318120 to 34721057 -115597063 QTL kidney weight QTL 2
W10q7 1 150318120 to 34721057 -115597063 QTL weight 10 weeks QTL 7