Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:34578149-34778175

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi122	1	34579133 to 34580216	1083		CpG island	CpG island 122
1700101I19Rik	1	34579202 to 34579711	509	-	antisense lncRNA gene	RIKEN cDNA 1700101I19 gene
Tssr6228	1	34579512 to 34579523	11	+	TSS region	transcription start site region 6228
Amer3	1	34579657 to 34590944	11287	+	protein coding gene	APC membrane recruitment 3
Tssr6229	1	34579695 to 34579751	56	+	TSS region	transcription start site region 6229
Gm28418	1	34607297 to 34607719	422	-	pseudogene	predicted gene 28418
Gm36984	1	34610572 to 34610806	234	-	pseudogene	predicted gene, 36984
Gm29730	1	34610908 to 34612303	1395	-	pseudogene	predicted gene, 29730
AA619741	1	34635544 to 34636189	645	-	pseudogene	expressed sequence AA619741
Gm38647	1	34657236 to 34667004	9768	-	lncRNA gene	predicted gene, 38647
Cpgi123	1	34677806 to 34678793	987		CpG island	CpG island 123
Tssr6230	1	34678149 to 34678175	26	+	TSS region	transcription start site region 6230
Tssr6231	1	34678176 to 34678213	37	+	TSS region	transcription start site region 6231
Gm32920	1	34685665 to 34688842	3177	-	lncRNA gene	predicted gene, 32920
Tssr6232	1	34697545 to 34697551	6	+	TSS region	transcription start site region 6232
Estoq4	1	34721057 to 73937756	39216699		QTL	embryo survival total QTL 4
W3q12	1	34721057 to 73937756	39216699		QTL	weight 3 weeks QTL 12
W10q6	1	34721057 to 73937756	39216699		QTL	weight 10 weeks QTL 6
Lvrq3	1	34721057 to 73937756	39216699		QTL	liver weight QTL 3
D1Mit72	1	34721057 to 34721205	148		DNA segment	DNA segment, Chr 1, Massachusetts Institute of Technology 72
Lgq5	1	34721057 to 73937756	39216699		QTL	late growth QTL 5
W6q14	1	34721057 to 73937756	39216699		QTL	weight 6 weeks QTL 14
Cpgi124	1	34723746 to 34723985	239		CpG island	CpG island 124
Gm46087	1	34748272 to 34757061	8789	-	lncRNA gene	predicted gene, 46087
Cpgi125	1	34750164 to 34751395	1231		CpG island	CpG island 125
Tssr6233	1	34750584 to 34750652	68	+	TSS region	transcription start site region 6233
Gm37224	1	34752775 to 34752922	147	+	pseudogene	predicted gene, 37224
Gm37845	1	34753123 to 34753477	354	+	pseudogene	predicted gene, 37845
Gm32790	1	34759936 to 34792553	32617	-	lncRNA gene	predicted gene, 32790
W10q7	1	150318120 to 34721057	-115597063		QTL	weight 10 weeks QTL 7
Splq3	1	150318120 to 34721057	-115597063		QTL	spleen weight QTL 3
Kidq2	1	150318120 to 34721057	-115597063		QTL	kidney weight QTL 2