Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:34479657-34690944

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm32566	1	34474787 to 34485981	11194	+	lncRNA gene	predicted gene, 32566
4930568A12Rik	1	34477167 to 34485933	8766	-	lincRNA gene	RIKEN cDNA 4930568A12 gene
Tssr36	1	34485312 to 34485329	17	+	TSS region	transcription start site region 36
Cpgi120	1	34485572 to 34486047	475		CpG island	CpG island 120
Tssr11221	1	34485924 to 34485946	22	-	TSS region	transcription start site region 11221
Tssr11222	1	34485948 to 34485967	19	-	TSS region	transcription start site region 11222
Tssr6226	1	34498369 to 34498441	72	+	TSS region	transcription start site region 6226
Prss39	1	34498430 to 34503062	4632	+	protein coding gene	protease, serine 39
Gm28416	1	34523716 to 34524007	291	-	pseudogene	predicted gene 28416
Tssr6227	1	34535626 to 34535657	31	+	TSS region	transcription start site region 6227
Cfc1	1	34535648 to 34544311	8663	+	protein coding gene	cripto, FRL-1, cryptic family 1
Gm28419	1	34538086 to 34538560	474	-	pseudogene	predicted gene 28419
Prss40	1	34543968 to 34560943	16975	-	protein coding gene	protease, serine 40
Cpgi121	1	34560767 to 34561011	244		CpG island	CpG island 121
Tssr11223	1	34560916 to 34560930	14	-	TSS region	transcription start site region 11223
Tssr11224	1	34560933 to 34560966	33	-	TSS region	transcription start site region 11224
Tssr11225	1	34560975 to 34560982	7	-	TSS region	transcription start site region 11225
Gm19225	1	34571217 to 34571942	725	+	pseudogene	predicted gene, 19225
Cpgi122	1	34579133 to 34580216	1083		CpG island	CpG island 122
1700101I19Rik	1	34579202 to 34579711	509	-	antisense lncRNA gene	RIKEN cDNA 1700101I19 gene
Tssr6228	1	34579512 to 34579523	11	+	TSS region	transcription start site region 6228
Amer3	1	34579657 to 34590944	11287	+	protein coding gene	APC membrane recruitment 3
Tssr6229	1	34579695 to 34579751	56	+	TSS region	transcription start site region 6229
Gm28418	1	34607297 to 34607719	422	-	pseudogene	predicted gene 28418
Gm36984	1	34610572 to 34610806	234	-	pseudogene	predicted gene, 36984
Gm29730	1	34610908 to 34612303	1395	-	pseudogene	predicted gene, 29730
AA619741	1	34635544 to 34636189	645	-	pseudogene	expressed sequence AA619741
Gm38647	1	34657236 to 34667004	9768	-	lncRNA gene	predicted gene, 38647
Cpgi123	1	34677806 to 34678793	987		CpG island	CpG island 123
Tssr6230	1	34678149 to 34678175	26	+	TSS region	transcription start site region 6230
Tssr6231	1	34678176 to 34678213	37	+	TSS region	transcription start site region 6231
Gm32920	1	34685665 to 34688842	3177	-	lncRNA gene	predicted gene, 32920