Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:34026595-34448820

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dst 1 33908225 to 34308661 400436 + protein coding gene dystonin
Gm38157 1 34032100 to 34033797 1697 + unclassified gene predicted gene, 38157
Tssr6176 1 34053657 to 34053688 31 + TSS region transcription start site region 6176
Tssr6177 1 34065762 to 34065767 5 + TSS region transcription start site region 6177
Tssr6178 1 34068569 to 34068601 32 + TSS region transcription start site region 6178
Tssr11215 1 34073844 to 34073879 35 - TSS region transcription start site region 11215
Tssr6179 1 34077190 to 34077219 29 + TSS region transcription start site region 6179
Tssr6180 1 34077227 to 34077245 18 + TSS region transcription start site region 6180
Tssr6181 1 34077280 to 34077290 10 + TSS region transcription start site region 6181
Tssr6182 1 34077294 to 34077302 8 + TSS region transcription start site region 6182
Tssr6183 1 34089264 to 34089279 15 + TSS region transcription start site region 6183
Tssr6184 1 34089283 to 34089296 13 + TSS region transcription start site region 6184
Tssr6185 1 34097265 to 34097294 29 + TSS region transcription start site region 6185
Tssr6186 1 34099738 to 34099740 2 + TSS region transcription start site region 6186
D1Dcr22 1 34112282 to 34112378 96 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 22
Mir6896 1 34117359 to 34117431 72 + miRNA gene microRNA 6896
Tssr6187 1 34121174 to 34121187 13 + TSS region transcription start site region 6187
Tssr6188 1 34121250 to 34121288 38 + TSS region transcription start site region 6188
Tssr6189 1 34121337 to 34121348 11 + TSS region transcription start site region 6189
Tssr34 1 34121363 to 34121372 9 + TSS region transcription start site region 34
Tssr6190 1 34121403 to 34121425 22 + TSS region transcription start site region 6190
Tssr6191 1 34121441 to 34121458 17 + TSS region transcription start site region 6191
Tssr6192 1 34121469 to 34121484 15 + TSS region transcription start site region 6192
Tssr6193 1 34124619 to 34124630 11 + TSS region transcription start site region 6193
D1Dcr23 1 34141676 to 34141771 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 23
Tssr11216 1 34144575 to 34144578 3 - TSS region transcription start site region 11216
D1Dcr50 1 34156460 to 34156555 95 DNA segment DNA Segment, Chr 1, Derry C. Roopenian 50
Tssr6194 1 34160148 to 34160161 13 + TSS region transcription start site region 6194
Tssr6195 1 34160254 to 34160271 17 + TSS region transcription start site region 6195
Gm26788 1 34166315 to 34177976 11661 - lncRNA gene predicted gene, 26788
Tssr6196 1 34171112 to 34171149 37 + TSS region transcription start site region 6196
Cpgi113 1 34177952 to 34178343 391 CpG island CpG island 113
Tssr6197 1 34184107 to 34184112 5 + TSS region transcription start site region 6197
Tssr6198 1 34186869 to 34186881 12 + TSS region transcription start site region 6198
Tssr6199 1 34187796 to 34187808 12 + TSS region transcription start site region 6199
Tssr6200 1 34187875 to 34187879 4 + TSS region transcription start site region 6200
Tssr6201 1 34197239 to 34197254 15 + TSS region transcription start site region 6201
Tssr6202 1 34212944 to 34212994 50 + TSS region transcription start site region 6202
Tssr6203 1 34215284 to 34215298 14 + TSS region transcription start site region 6203
Tssr6204 1 34215301 to 34215313 12 + TSS region transcription start site region 6204
Tssr6205 1 34215324 to 34215332 8 + TSS region transcription start site region 6205
Tssr6206 1 34227913 to 34227924 11 + TSS region transcription start site region 6206
Cpgi114 1 34236112 to 34236793 681 CpG island CpG island 114
Tssr6207 1 34236544 to 34236570 26 + TSS region transcription start site region 6207
Tssr6208 1 34236585 to 34236602 17 + TSS region transcription start site region 6208
D630036G22Rik 1 34236595 to 34238820 2225 unclassified gene RIKEN cDNA D630036G22 gene
Tssr6209 1 34236614 to 34236652 38 + TSS region transcription start site region 6209
Tssr6210 1 34236683 to 34236694 11 + TSS region transcription start site region 6210
Tssr6211 1 34238094 to 34238106 12 + TSS region transcription start site region 6211
A930005N03Rik 1 34269882 to 34271128 1246 - unclassified non-coding RNA gene RIKEN cDNA A930005N03 gene
Tssr6212 1 34307768 to 34307783 15 + TSS region transcription start site region 6212
Tssr6213 1 34307929 to 34307942 13 + TSS region transcription start site region 6213
Gm37958 1 34329433 to 34330307 874 - lincRNA gene predicted gene, 37958
Gm37385 1 34350775 to 34351161 386 + unclassified gene predicted gene, 37385
Gm5266 1 34367374 to 34369003 1629 + pseudogene predicted gene 5266
Gm3052 1 34415050 to 34417986 2936 - pseudogene predicted gene 3052
Gm37233 1 34427002 to 34433264 6262 - lincRNA gene predicted gene, 37233
Cpgi115 1 34432848 to 34433306 458 CpG island CpG island 115
Mir5103 1 34433121 to 34433199 78 - miRNA gene microRNA 5103
Tssr11217 1 34433249 to 34433298 49 - TSS region transcription start site region 11217
n-TEttc1 1 34434812 to 34434883 71 - tRNA gene nuclear encoded tRNA glutamic acid 1 (anticodon TTC)
Cpgi116 1 34434889 to 34435227 338 CpG island CpG island 116
Tssr6214 1 34435092 to 34435106 14 + TSS region transcription start site region 6214
Ccdc115 1 34436670 to 34439672 3002 - protein coding gene coiled-coil domain containing 115
Cpgi117 1 34439128 to 34440365 1237 CpG island CpG island 117
Tssr11218 1 34439337 to 34439379 42 - TSS region transcription start site region 11218
Gm28306 1 34439511 to 34444730 5219 - antisense lncRNA gene predicted gene 28306
Imp4 1 34439829 to 34445747 5918 + protein coding gene IMP4, U3 small nucleolar ribonucleoprotein
Tssr6215 1 34439855 to 34439910 55 + TSS region transcription start site region 6215
Tssr6216 1 34443868 to 34443886 18 + TSS region transcription start site region 6216
Tssr6217 1 34444857 to 34444904 47 + TSS region transcription start site region 6217
Tssr6218 1 34447031 to 34447041 10 + TSS region transcription start site region 6218