Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:33481416-33761423

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prim2 1 33453810 to 33669795 215985 - protein coding gene DNA primase, p58 subunit
Gm29228 1 33482101 to 33482518 417 + pseudogene predicted gene 29228
Gm39618 1 33522521 to 33530620 8099 + lncRNA gene predicted gene, 39618
Tssr6147 1 33578986 to 33579003 17 + TSS region transcription start site region 6147
D1Mit277 1 33591425 to 33591574 149 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 277
Tssr11187 1 33605825 to 33605833 8 - TSS region transcription start site region 11187
Gm37618 1 33613758 to 33616832 3074 - unclassified gene predicted gene, 37618
Tssr11188 1 33621416 to 33621423 7 - TSS region transcription start site region 11188
Cpgi102 1 33637957 to 33638256 299 CpG island CpG island 102
Tssr11189 1 33638004 to 33638020 16 - TSS region transcription start site region 11189
Tssr11190 1 33649153 to 33649173 20 - TSS region transcription start site region 11190
Gm17813 1 33657781 to 33658108 327 + pseudogene predicted gene, 17813
Cpgi103 1 33669484 to 33670637 1153 CpG island CpG island 103
Tssr11191 1 33669728 to 33669739 11 - TSS region transcription start site region 11191
Tssr11192 1 33669745 to 33669792 47 - TSS region transcription start site region 11192
Tssr11193 1 33669795 to 33669806 11 - TSS region transcription start site region 11193
Tssr6148 1 33669816 to 33669856 40 + TSS region transcription start site region 6148
1700001G17Rik 1 33669824 to 33670712 888 + lncRNA gene RIKEN cDNA 1700001G17 gene
Tssr6149 1 33669861 to 33669880 19 + TSS region transcription start site region 6149
Gm38173 1 33671915 to 33674228 2313 - unclassified gene predicted gene, 38173
Gm32229 1 33714183 to 33719895 5712 - lncRNA gene predicted gene, 32229
Cpgi104 1 33719674 to 33720832 1158 CpG island CpG island 104
Tssr6150 1 33719863 to 33719901 38 + TSS region transcription start site region 6150
Rab23 1 33719888 to 33742564 22676 + protein coding gene RAB23, member RAS oncogene family
Tssr6151 1 33719903 to 33719945 42 + TSS region transcription start site region 6151
Tssr6152 1 33719980 to 33719992 12 + TSS region transcription start site region 6152
Tssr11194 1 33720079 to 33720097 18 - TSS region transcription start site region 11194
Tssr11195 1 33720257 to 33720270 13 - TSS region transcription start site region 11195
Tssr11196 1 33720354 to 33720363 9 - TSS region transcription start site region 11196
Tssr31 1 33738772 to 33738798 26 - TSS region transcription start site region 31
Tssr32 1 33738923 to 33738959 36 + TSS region transcription start site region 32
Cpgi105 1 33739391 to 33739564 173 CpG island CpG island 105
Bag2 1 33745484 to 33757750 12266 - protein coding gene BCL2-associated athanogene 2
Gm37905 1 33748007 to 33748347 340 + unclassified gene predicted gene, 37905
Cpgi106 1 33757137 to 33758143 1006 CpG island CpG island 106
Tssr11197 1 33757686 to 33757695 9 - TSS region transcription start site region 11197
Tssr11198 1 33757711 to 33757780 69 - TSS region transcription start site region 11198
Tssr11199 1 33757922 to 33757946 24 - TSS region transcription start site region 11199
Tssr11200 1 33757960 to 33757977 17 - TSS region transcription start site region 11200