Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 1:31183790-32653896

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ebas2 1 3197400 to 32511500 29314100 QTL epidermolysis bullosa acquisita severity 2
4931428L18Rik 1 31141078 to 31222656 81578 - protein coding gene RIKEN cDNA 4931428L18 gene
Lgsn 1 31176435 to 31204725 28290 + protein coding gene lengsin, lens protein with glutamine synthetase domain
D1Mit225 1 31206039 to 31206151 112 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 225
Tssr11183 1 31222604 to 31222620 16 - TSS region transcription start site region 11183
Tssr11184 1 31222627 to 31222643 16 - TSS region transcription start site region 11184
Tssr11185 1 31222644 to 31222677 33 - TSS region transcription start site region 11185
Tssr6143 1 31222782 to 31222792 10 + TSS region transcription start site region 6143
Tssr6144 1 31222808 to 31222821 13 + TSS region transcription start site region 6144
Pih1d3 1 31222839 to 31224287 1448 + protein coding gene PIH1 domain containing 3
Tssr6145 1 31253248 to 31253251 3 + TSS region transcription start site region 6145
Gm26145 1 31259593 to 31259719 126 - snoRNA gene predicted gene, 26145
Gm4850 1 31267326 to 31267884 558 + pseudogene predicted pseudogene 4850
Gm28645 1 31274892 to 31275455 563 + pseudogene predicted gene 28645
Gm6489 1 31286945 to 31287640 695 + pseudogene predicted gene 6489
Gm10307 1 31559606 to 31560831 1225 + pseudogene predicted gene 10307
Gm19680 1 31615149 to 31616661 1512 + pseudogene predicted gene, 19680
Gm23032 1 31656632 to 31656738 106 - snRNA gene predicted gene, 23032
Gm7910 1 31736307 to 31737089 782 + pseudogene predicted gene 7910
D1Mit20 1 31918790 to 31918896 106 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 20
Cpgi101 1 32172361 to 32173190 829 CpG island CpG island 101
Tssr6146 1 32172711 to 32172792 81 + TSS region transcription start site region 6146
Khdrbs2 1 32172714 to 32658568 485854 + protein coding gene KH domain containing, RNA binding, signal transduction associated 2
Gm25814 1 32213133 to 32213239 106 - snRNA gene predicted gene, 25814
Gm46077 1 32250668 to 32272788 22120 + pseudogene predicted gene, 46077
D1Mit319 1 32458783 to 32459069 286 DNA segment DNA segment, Chr 1, Massachusetts Institute of Technology 319
Gm37999 1 32473757 to 32475565 1808 + unclassified gene predicted gene, 37999
Gm37110 1 32485315 to 32486942 1627 + unclassified gene predicted gene, 37110
Gm37911 1 32496444 to 32497988 1544 + unclassified gene predicted gene, 37911
Gm9839 1 32519563 to 32520999 1436 - protein coding gene predicted gene 9839
Gm37792 1 32539028 to 32542440 3412 + unclassified gene predicted gene, 37792
Gm5415 1 32543686 to 32547294 3608 - protein coding gene predicted gene 5415
Gm24732 1 32568359 to 32568421 62 - snRNA gene predicted gene, 24732